RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 OR52E2Q8NGJ4 325 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 GATAD2BQ8WXI9 593 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 LIN28AQ9H9Z2 209 aaKnown RBP17.17■□□□□ 0.34
COL18A1-202ENST00000355480 KLHL21Q9UJP4 597 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 LCN1P31025 176 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 MAMDC2Q7Z304 686 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-202ENST00000355480 MTG2Q9H4K7 406 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 SOX17Q9H6I2 414 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-202ENST00000355480 ZNF442Q9H7R0 627 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 KCPQ6ZWJ8 1503 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 PRAMEF2O60811 474 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 OXSR1O95747 527 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-202ENST00000355480 ETFAP13804 333 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 RGS19P49795 217 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 GRIN2CQ14957 1233 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 TMEM236Q5W0B7 351 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 C17orf99Q6UX52 265 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 CLECL1Q8IZS7 167 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 STOML3Q8TAV4 291 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 SCGB1C1Q8TD33 95 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 RHBDD1Q8TEB9 315 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 CDCA3Q99618 268 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-202ENST00000355480 GKN3PP0CG01 181 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 PET100P0DJ07 73 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 AMY2BP19961 511 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 DRD1P21728 446 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 NDUFAF5Q5TEU4 345 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 VTCN1Q7Z7D3 282 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 ECHDC3Q96DC8 303 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 TMEM165Q9HC07 324 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 TMEM9Q9P0T7 183 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 ZNF850A8MQ14 1090 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 SLC16A8O95907 504 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 THBS2P35442 1172 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 ACY1Q03154 408 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 EEF1A1P5Q5VTE0 462 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 DCDC5Q6ZRR9 648 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 ARHGAP12Q8IWW6 846 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 C7orf43Q8WVR3 580 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 ASB12Q8WXK4 309 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 E7ESA3 106 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 H7C417 338 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 M0QZQ0 153 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 PLEKHN1Q494U1 663 aaPredicted RBP17.16■□□□□ 0.34
COL18A1-202ENST00000355480 CDNFQ49AH0 187 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 RAB6CQ53S08 254 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 KANK2Q63ZY3 851 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 LRRN1Q6UXK5 716 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 KLBQ86Z14 1044 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 TMEM19Q96HH6 336 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 LRR1Q96L50 414 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 RAB6CQ9H0N0 254 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 CCM2LQ9NUG4 571 aaPredicted RBP17.16■□□□□ 0.34
COL18A1-202ENST00000355480 ZDHHC7Q9NXF8 308 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 A0A1W2PPW3 197 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 RASAL1O95294 804 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 GNMTQ14749 295 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 XKRXQ6PP77 449 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 BLOC1S3Q6QNY0 202 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 ZNF551Q7Z340 670 aaPredicted RBP17.16■□□□□ 0.34
COL18A1-202ENST00000355480 MRPL10Q7Z7H8 261 aaKnown RBP17.16■□□□□ 0.34
COL18A1-202ENST00000355480 TCEAL8Q8IYN2 117 aa17.16■□□□□ 0.34
COL18A1-202ENST00000355480 TRIM64BA6NI03 449 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 MEN1O00255 615 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 EEF1E1O43324 174 aaKnown RBP17.15■□□□□ 0.34
COL18A1-202ENST00000355480 GRHL2Q6ISB3 625 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 LEG1Q6P5S2 330 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 CDHR3Q6ZTQ4 885 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 COMMD6Q7Z4G1 85 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 LRRTM3Q86VH5 581 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 MFSD8Q8NHS3 518 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 SHISA4Q96DD7 197 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 HOXD1Q9GZZ0 328 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 KCNN3Q9UGI6 736 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 ABCG2Q9UNQ0 655 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 HPRP00739 348 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 PIGFQ07326 219 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 RPA4Q13156 261 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 OR5AR1Q8NGP9 310 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 PELI2Q9HAT8 420 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 ACTL7AQ9Y615 435 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 SMCO3A2RU48 225 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 CD8B2A6NJW9 211 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 CD8BP10966 210 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 ARSAP15289 507 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 RCAN2Q14206 197 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 XKR5Q6UX68 686 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 TEX26Q8N6G2 289 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 CLCN2P51788 898 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 MOGQ16653 247 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 DEFB133Q30KQ1 61 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 BTBD16Q32M84 506 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 HMBOX1Q6NT76 420 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 FAM46AQ96IP4 442 aaKnown RBP17.15■□□□□ 0.34
COL18A1-202ENST00000355480 SLC45A3Q96JT2 553 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 ACTRT3Q9BYD9 372 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 GJE1A6NN92 205 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 IST1P53990 364 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 C15orf39Q6ZRI6 1047 aa17.15■□□□□ 0.34
COL18A1-202ENST00000355480 TMEM130Q8N3G9 435 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms