RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 SLC28A2O43868 658 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 UGT2B11O75310 529 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 E2F6O75461 281 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 C8orf89P0DMQ9 161 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 RPS4Y1P22090 263 aaKnown RBP16.13■□□□□ 0.17
VPS13B-201ENST00000355155 MLLT3P42568 568 aaPredicted RBP16.13■□□□□ 0.17
VPS13B-201ENST00000355155 ARRB1P49407 418 aaPredicted RBP16.13■□□□□ 0.17
VPS13B-201ENST00000355155 CLPPQ16740 277 aaPredicted RBP16.13■□□□□ 0.17
VPS13B-201ENST00000355155 HS3ST5Q8IZT8 346 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 RAB8BQ92930 207 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 ZNF566Q969W8 418 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 ZNF578Q96N58 590 aaPredicted RBP16.13■□□□□ 0.17
VPS13B-201ENST00000355155 BARD1Q99728 777 aaKnown RBP16.13■□□□□ 0.17
VPS13B-201ENST00000355155 SLC38A1Q9H2H9 487 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 DDX18Q9NVP1 670 aaKnown RBP16.13■□□□□ 0.17
VPS13B-201ENST00000355155 MAT2BQ9NZL9 334 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 NDUFA13Q9P0J0 144 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 CLDN16Q9Y5I7 305 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 B4GAT1O43505 415 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 CHST10O43529 356 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 DUX1O43812 170 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 LGI1O95970 557 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 AK1P00568 194 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 OPN1SWP03999 348 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 IFNW1P05000 195 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 RNH1P13489 461 aaKnown RBP16.13■□□□□ 0.17
VPS13B-201ENST00000355155 GFERP55789 205 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 SIM1P81133 766 aaPredicted RBP16.13■□□□□ 0.17
VPS13B-201ENST00000355155 LTB4RQ15722 352 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 MICAQ29983 383 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 RPS26P11Q5JNZ5 115 aaPredicted RBP16.13■□□□□ 0.17
VPS13B-201ENST00000355155 KRT80Q6KB66 452 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 FAM111BQ6SJ93 734 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 RABEPKQ7Z6M1 372 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 SPPL2AQ8TCT8 520 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 RMND5BQ96G75 393 aaPredicted RBP16.13■□□□□ 0.17
VPS13B-201ENST00000355155 ARHGDIGQ99819 225 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 PIGUQ9H490 435 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 DUSP22Q9NRW4 184 aa16.13■□□□□ 0.17
VPS13B-201ENST00000355155 CTNSO60931 367 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 EIF2S1P05198 315 aaKnown RBP16.12■□□□□ 0.17
VPS13B-201ENST00000355155 CTSBP07858 339 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 ANKRD34CP0C6C1 535 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 PABPC4LP0CB38 370 aaKnown RBP16.12■□□□□ 0.17
VPS13B-201ENST00000355155 ANXA8P13928 327 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 CD1CP29017 333 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 RRM2P31350 389 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 SHC2P98077 582 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 BNIP3Q12983 259 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 KCNAB2Q13303 367 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 LASP1Q14847 261 aaKnown RBP16.12■□□□□ 0.17
VPS13B-201ENST00000355155 OR5D16Q8NGK9 328 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 SAP25Q8TEE9 199 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 FBXL20Q96IG2 436 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 LY6G6EA0A0G2JKS1 128 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 HYKKA2RU49 373 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 EPPINO95925 133 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 NR2F1P10589 423 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 CDH2P19022 906 aaPredicted RBP16.12■□□□□ 0.17
VPS13B-201ENST00000355155 IGFBP5P24593 272 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 PRKAR1BP31321 381 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 RBM48Q5RL73 367 aaKnown RBP16.12■□□□□ 0.17
VPS13B-201ENST00000355155 FAM92BQ6ZTR7 304 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 ZNF555Q8NEP9 628 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 OR5T3Q8NGG3 340 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 OR4C6Q8NH72 309 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 PHF10Q8WUB8 498 aaKnown RBP16.12■□□□□ 0.17
VPS13B-201ENST00000355155 CYGBQ8WWM9 190 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 SLC35A4Q96G79 324 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 C16orf58Q96GQ5 468 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 ORC6Q9Y5N6 252 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 U3KQA8 63 aa16.12■□□□□ 0.17
VPS13B-201ENST00000355155 SGK494L7N484 410 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 TNFRSF11BO00300 401 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 OXSR1O95747 527 aaPredicted RBP16.11■□□□□ 0.17
VPS13B-201ENST00000355155 TFAP2AP05549 437 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 RPL5P46777 297 aaKnown RBP16.11■□□□□ 0.17
VPS13B-201ENST00000355155 ALDH3B2P48448 385 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 HSD11B2P80365 405 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 TEKQ02763 1124 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 GRM7Q14831 915 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 FAM214AQ32MH5 1076 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 ZNF770Q6IQ21 691 aaPredicted RBP16.11■□□□□ 0.17
VPS13B-201ENST00000355155 BORAQ6PGQ7 559 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 THAP5Q7Z6K1 395 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 PARP8Q8N3A8 854 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 TTC29Q8NA56 475 aaPredicted RBP16.11■□□□□ 0.17
VPS13B-201ENST00000355155 GIPC3Q8TF64 312 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 HDAC2Q92769 488 aaKnown RBP16.11■□□□□ 0.17
VPS13B-201ENST00000355155 DPYSL5Q9BPU6 564 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 PELOQ9BRX2 385 aaKnown RBP16.11■□□□□ 0.17
VPS13B-201ENST00000355155 LMF2Q9BU23 707 aaKnown RBP16.11■□□□□ 0.17
VPS13B-201ENST00000355155 ZNF768Q9H5H4 540 aaKnown RBP16.11■□□□□ 0.17
VPS13B-201ENST00000355155 PDP1Q9P0J1 537 aaPredicted RBP16.11■□□□□ 0.17
VPS13B-201ENST00000355155 NDRG4Q9ULP0 352 aaKnown RBP16.11■□□□□ 0.17
VPS13B-201ENST00000355155 LOC100130705A0A1B0GUX0 176 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 TTC36A6NLP5 189 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 ZNF749O43361 778 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 LAMTOR5O43504 91 aa16.11■□□□□ 0.17
VPS13B-201ENST00000355155 SDC3O75056 442 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms