RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 OTCP00480 354 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 CFDP00746 253 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-203ENST00000354674 VIPP01282 170 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 RNF224P0DH78 156 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 COX10Q12887 443 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 FZD2Q14332 565 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 NKG7Q16617 165 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 C10orf62Q5T681 223 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-203ENST00000354674 FRMPD2BQ6IN97 320 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 LETMD1Q6P1Q0 360 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 AGTRAPQ6RW13 159 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 ZNF704Q6ZNC4 412 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-203ENST00000354674 GPRIN3Q6ZVF9 776 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 DCUN1D3Q8IWE4 304 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 RGL4Q8IZJ4 473 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 STPG2Q8N412 459 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 C2CD4CQ8TF44 421 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 TSACCQ96A04 125 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-203ENST00000354674 DUSP15Q9H1R2 295 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-203ENST00000354674 KCNK6Q9Y257 313 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 NINQ8N4C6 2090 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 LOC102723532A0A0G2JNH3 316 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 A6NCN8 305 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 EFCAB10A6NFE3 127 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 IFRD1O00458 451 aaPredicted RBP9.55□□□□□ -0.88
SYNE1-203ENST00000354674 ATG12O94817 140 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 APOC3P02656 99 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 EBLN1P0CF75 366 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 UROSP10746 265 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 EPB42P16452 691 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 CTSKP43235 329 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 ZNF81P51508 661 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 QPRTQ15274 297 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 UAP1L1Q3KQV9 507 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 LCN8Q6JVE9 175 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 BHLHB9Q6PI77 547 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 PLET1Q6UQ28 207 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 SLC16A13Q7RTY0 426 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 WDR5BQ86VZ2 330 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 NRROSQ86YC3 692 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 OR5AR1Q8NGP9 310 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 GPBAR1Q8TDU6 330 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 ZNF480Q8WV37 535 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 DNASE2BQ8WZ79 361 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 SLC9A6Q92581 669 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 SLC6A18Q96N87 628 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 INSM2Q96T92 566 aaPredicted RBP9.55□□□□□ -0.88
SYNE1-203ENST00000354674 SGPP1Q9BX95 441 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 BEX1Q9HBH7 125 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 B3GNT2Q9NY97 397 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 RAPGEFL1Q9UHV5 662 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 PPIEQ9UNP9 301 aaKnown RBP9.55□□□□□ -0.88
SYNE1-203ENST00000354674 PTP4A3O75365 173 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 KDM4BO94953 1096 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 WNT1P04628 370 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 RPN2P04844 631 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 SLC35G4P0C7Q5 338 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 THEGLP0DJG4 465 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 HGFP14210 728 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 JUPP14923 745 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 CBR1P16152 277 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 BCKDHBP21953 392 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 IDSP22304 550 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 PIK3CBP42338 1070 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 PUDPQ08623 228 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 ARHGAP19Q14CB8 494 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 RBBP7Q16576 425 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 GGTA1PQ4G0N0 100 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 PYDC2Q56P42 97 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 CCDC36Q8IYA8 594 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 MAML2Q8IZL2 1156 aaPredicted RBP9.55□□□□□ -0.88
SYNE1-203ENST00000354674 OR4F6Q8NGB9 312 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 ZNF431Q8TF32 576 aaPredicted RBP9.55□□□□□ -0.88
SYNE1-203ENST00000354674 RAD51AP1Q96B01 352 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 KLHL15Q96M94 604 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 TUBB1Q9H4B7 451 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 TRPS1Q9UHF7 1281 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 SPATA2Q9UM82 520 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 ASF1AQ9Y294 204 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 GMPPBQ9Y5P6 360 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 CEP192Q8TEP8 1941 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 TCRBV5S2A0A599 114 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 GSTA4O15217 222 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 GMDSO60547 372 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 HPGDSO60760 199 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 MED22Q15528 200 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 SNAPC1Q16533 368 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 TEX261Q6UWH6 196 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 TRILQ7L0X0 811 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 KANSL1Q7Z3B3 1105 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 MILR1Q7Z6M3 343 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 ZFP82Q8N141 532 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 DTWD1Q8N5C7 304 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 L3MBTL4Q8NA19 623 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 ASB15Q8WXK1 588 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 KLHDC7BQ96G42 594 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 OR4K3Q96R72 315 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 TMEM168Q9H0V1 697 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 ZCCHC4Q9H5U6 513 aa9.55□□□□□ -0.88
SYNE1-203ENST00000354674 RNF121Q9H920 327 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms