RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 DGAT2L6Q6ZPD8 337 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 DOHHQ9BU89 302 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 VCXQ9H320 206 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 RARRES3Q9UL19 164 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 C19orf53Q9UNZ5 99 aaPredicted RBP19.21■□□□□ 0.67
TRIM4-202ENST00000354241 SRPK3Q9UPE1 567 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 KCNE3Q9Y6H6 103 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 COL5A1P20908 1838 aaPredicted RBP19.21■□□□□ 0.67
TRIM4-202ENST00000354241 ZNF318Q5VUA4 2279 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 A0A087WV62 115 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 PGM3O95394 542 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 ZNF806P0C7X5 589 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 ACP1P24666 158 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 MGAT2Q10469 447 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 ELOAQ14241 798 aaKnown RBP19.21■□□□□ 0.67
TRIM4-202ENST00000354241 MFSD4BQ5TF39 518 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 ST13P4Q8IZP2 240 aaPredicted RBP19.21■□□□□ 0.67
TRIM4-202ENST00000354241 ADAMTS15Q8TE58 950 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 RBM18Q96H35 190 aaKnown RBP19.21■□□□□ 0.67
TRIM4-202ENST00000354241 DGAT2Q96PD7 388 aa19.21■□□□□ 0.67
TRIM4-202ENST00000354241 CCDC88CQ9P219 2028 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 hCG_2039718K7EN88 272 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 GNGT2O14610 69 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 PLOD3O60568 738 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 SEMG1P04279 462 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 FABP3P05413 133 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 MAN2A2P49641 1150 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 IGLV3-21P80748 117 aaPredicted RBP19.2■□□□□ 0.66
TRIM4-202ENST00000354241 TXNL4AP83876 142 aaKnown RBP19.2■□□□□ 0.66
TRIM4-202ENST00000354241 EXOSC7Q15024 291 aaKnown RBP19.2■□□□□ 0.66
TRIM4-202ENST00000354241 GPAT3Q53EU6 434 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 CDC73Q6P1J9 531 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 B3GNT8Q7Z7M8 397 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 METTL25Q8N6Q8 603 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 SMYD1Q8NB12 490 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 LZICQ8WZA0 190 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 SLC9A6Q92581 669 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 IL1RAPQ9NPH3 570 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 LANCL2Q9NS86 450 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 DNAJB9Q9UBS3 223 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 OAZ3Q9UMX2 235 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 NUP210LQ5VU65 1888 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 FER1L5A0AVI2 2057 aa19.2■□□□□ 0.66
TRIM4-202ENST00000354241 TMEM229AB2RXF0 380 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 CDX4O14627 284 aaPredicted RBP19.19■□□□□ 0.66
TRIM4-202ENST00000354241 ASNA1O43681 348 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 PDE9AO76083 593 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 GP1BAP07359 652 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 CSTF2P33240 577 aaKnown RBP eCLIP19.19■□□□□ 0.66
TRIM4-202ENST00000354241 KCNJ10P78508 379 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 FUT5Q11128 374 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 NRF1Q16656 503 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 ZBTB49Q6ZSB9 765 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 OLIG3Q7RTU3 272 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 EPHX4Q8IUS5 362 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 GALNT12Q8IXK2 581 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 VWA5B2Q8N398 1253 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 SPPL2AQ8TCT8 520 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 RIT1Q92963 219 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 OR1F2PQ96R84 312 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 NECTIN3Q9NQS3 549 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 OCIAD1Q9NX40 245 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 SIDT1Q9NXL6 827 aaKnown RBP19.19■□□□□ 0.66
TRIM4-202ENST00000354241 PDLIM1O00151 329 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 SCRG1O75711 98 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 TIAF1O95411 115 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 ZNF23P17027 643 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 MAGEA2P43356 314 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 CRISP3P54108 245 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 GNA13Q14344 377 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 MINDY4Q4G0A6 757 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 ATAD3BQ5T9A4 648 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 WLSQ5T9L3 541 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 RHBDD2Q6NTF9 364 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 SUMF1Q8NBK3 374 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 SLC16A11Q8NCK7 471 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 CTHRC1Q96CG8 243 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 SLC35A4Q96G79 324 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 PTCHD1Q96NR3 888 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 ZNF607Q96SK3 696 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 SLC29A1Q99808 456 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 TREX2Q9BQ50 279 aaPredicted RBP19.19■□□□□ 0.66
TRIM4-202ENST00000354241 C9orf16Q9BUW7 83 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 EDEM2Q9BV94 578 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 RUBCNLQ9H714 662 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 CXorf21Q9HAI6 301 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 NTN4Q9HB63 628 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 RXFP3Q9NSD7 469 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 BAG5Q9UL15 447 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 ABCG2Q9UNQ0 655 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 ZNF451Q9Y4E5 1061 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 CLDN16Q9Y5I7 305 aa19.19■□□□□ 0.66
TRIM4-202ENST00000354241 GPR179Q6PRD1 2367 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 ASCC3Q8N3C0 2202 aaKnown RBP19.18■□□□□ 0.66
TRIM4-202ENST00000354241 DUXAA6NLW8 204 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 EFCAB7A8K855 629 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 SOCS2O14508 198 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 IFNA16P05015 189 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 CD59P13987 128 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 ZNF26P17031 533 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms