RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZNF354BQ96LW1 612 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 COL21A1Q96P44 957 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 OR7D2Q96RA2 312 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF607Q96SK3 696 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 FEVQ99581 238 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 IER2Q9BTL4 223 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 BTBD2Q9BX70 525 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 YIPF3Q9GZM5 350 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 RAB33BQ9H082 229 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 C3orf14Q9HBI5 128 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 KRT84Q9NSB2 600 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 GIN1Q9NXP7 522 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 EPHA6Q9UF33 1036 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 FBXL21Q9UKT6 434 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 LIPT1Q9Y234 373 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SH3GLB1Q9Y371 365 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 TESMINQ9Y4I5 508 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 KCNE3Q9Y6H6 103 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF318Q5VUA4 2279 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 A0A087WV62 115 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 TMEM247A6NEH6 219 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 LMO7DNF2Z398 122 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 H3BSA7 217 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF701M0R085 212 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 SYT5O00445 386 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 CASC3O15234 703 aaKnown RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 AQP9O43315 295 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 PLOD3O60568 738 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 SRPX2O60687 465 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 PIAS2O75928 621 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 UBXN7O94888 489 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 SLITRK5O94991 958 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 CCNB2O95067 398 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 ZIC2O95409 532 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 GPR75O95800 540 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 LGI1O95970 557 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 ATP1B1P05026 303 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 PROS1P07225 676 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 HTR1AP08908 422 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 ALPPL2P10696 532 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 PORP16435 677 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 IL7RP16871 459 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 TYRP1P17643 537 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 AGXTP21549 392 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 MAOBP27338 520 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 EPHA2P29317 976 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 PPP2R1BP30154 601 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 TTKP33981 857 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 PTGER1P34995 402 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 MAP3K8P41279 467 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 YAP1P46937 504 aaKnown RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 CAPZBP47756 277 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 CXCL12P48061 93 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 EPHA4P54764 986 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 CDH12P55289 794 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 RAB38P57729 211 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 NUP107P57740 925 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 VSX2P58304 361 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 HNRNPKP61978 463 aaKnown RBP eCLIP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 RPP38P78345 283 aaKnown RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 TEKQ02763 1124 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 RPL6Q02878 288 aaKnown RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 MGAT2Q10469 447 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 NPRL3Q12980 569 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 MAD2L1BPQ15013 274 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 MEP1AQ16819 746 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 INAVAQ3KP66 663 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 ZBED5Q49AG3 693 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 CYP27C1Q4G0S4 372 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF628Q5EBL2 1059 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 COLEC12Q5KU26 742 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 MLIPQ5VWP3 458 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 AP1ARQ63HQ0 302 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 LAIR1Q6GTX8 287 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 CDC73Q6P1J9 531 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 DHRS4L2Q6PKH6 230 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 PRSS41Q7RTY9 318 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 COMTD1Q86VU5 262 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 KRT73Q86Y46 540 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 SLC44A2Q8IWA5 706 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 UBALD2Q8IYN6 164 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 ATG16L2Q8NAA4 619 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 TMEM52Q8NDY8 209 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF675Q8TD23 568 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 LMX1AQ8TE12 382 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 PHF10Q8WUB8 498 aaKnown RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 PROX1Q92786 737 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 KAT2AQ92830 837 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 TANKQ92844 425 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 ANKRD9Q96BM1 317 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 CTHRC1Q96CG8 243 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 SLC35A4Q96G79 324 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 TCTN2Q96GX1 697 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 HSPA12BQ96MM6 686 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 MS4A4EQ96PG1 132 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 TRNT1Q96Q11 434 aaKnown RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 APOL4Q9BPW4 351 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 TUBA1CQ9BQE3 449 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 WFDC6Q9BQY6 131 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms