RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 ATG16L2Q8NAA4 619 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 OR4A15Q8NGL6 344 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 OR6Q1Q8NGQ2 317 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 OR5AK3PQ8NH89 298 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 KCNC2Q96PR1 638 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 DDX31Q9H8H2 851 aaKnown RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 REEP1Q9H902 201 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 INIPQ9NRY2 104 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 RASSF1Q9NS23 344 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 FAM120CQ9NX05 1096 aaKnown RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 ATP6V1HQ9UI12 483 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 MRPS2Q9Y399 296 aaKnown RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 ATG4BQ9Y4P1 393 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 ZNF860A6NHJ4 632 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 BMP4P12644 408 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 DDCP20711 480 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 ATP5A1P25705 553 aaKnown RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 KRT20P35900 424 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 SERPINB10P48595 397 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 ARRB1P49407 418 aaPredicted RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 C21orf58P58505 322 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 STXBP1P61764 594 aaKnown RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 OLR1P78380 273 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 RGS1Q08116 209 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 SLC9A5Q14940 896 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 HEPACAMQ14CZ8 416 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 DEFB134Q4QY38 66 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 TMEM35AQ53FP2 167 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 C18orf63Q68DL7 685 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 OGFOD3Q6PK18 319 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 ANGPTL8Q6UXH0 198 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 PRSS41Q7RTY9 318 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 C17orf82Q86X59 251 aaPredicted RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 VPS37AQ8NEZ2 397 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 STARD8Q92502 1023 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 BTBD2Q9BX70 525 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 ASPSCR1Q9BZE9 553 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 SMOC1Q9H4F8 434 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 FBXO8Q9NRD0 319 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 THUMPD1Q9NXG2 353 aaKnown RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 TNRC6BQ9UPQ9 1833 aaKnown RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 PGRMC2O15173 223 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 CAPZBP47756 277 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 ITGA1P56199 1179 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 RPP38P78345 283 aaKnown RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 MVKQ03426 396 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 GAB1Q13480 694 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 PDE7AQ13946 482 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 HLA-BQ31612 363 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 SNAP47Q5SQN1 464 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 USP53Q70EK8 1073 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 PRSS48Q7RTY5 328 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 CAMKMTQ7Z624 323 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 UTP15Q8TED0 518 aaKnown RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 PHF10Q8WUB8 498 aaKnown RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 APH1BQ8WW43 257 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 RERGQ96A58 199 aaPredicted RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 TPD52L3Q96J77 140 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 QRFPRQ96P65 431 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 BHLHE41Q9C0J9 482 aaPredicted RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 CCNB1IP1Q9NPC3 277 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 SLAMF7Q9NQ25 335 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 ATAD3AQ9NVI7 634 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 ANKMY1Q9P2S6 941 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 ACSL6Q9UKU0 697 aa12.64□□□□□ -0.39
UBA3-201ENST00000349511 PAIP2BQ9ULR5 123 aaKnown RBP12.64□□□□□ -0.39
UBA3-201ENST00000349511 A0A1W2PR48 441 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 A0A1W2PRB8 838 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 MRPS14O60783 128 aaKnown RBP12.63□□□□□ -0.39
UBA3-201ENST00000349511 WBP4O75554 376 aaKnown RBP12.63□□□□□ -0.39
UBA3-201ENST00000349511 LCKP06239 509 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 NUDT7P0C024 238 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 TGFBR1P36897 503 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 RPS3AP61247 264 aaKnown RBP12.63□□□□□ -0.39
UBA3-201ENST00000349511 NPRL3Q12980 569 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 ZNF750Q32MQ0 723 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 IQCCQ4KMZ1 466 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 FAHD1Q6P587 224 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 AHSA2Q719I0 299 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 RPL3LQ92901 407 aaKnown RBP12.63□□□□□ -0.39
UBA3-201ENST00000349511 TM4SF19Q96DZ7 209 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 AHCYL2Q96HN2 611 aaKnown RBP12.63□□□□□ -0.39
UBA3-201ENST00000349511 PITX2Q99697 317 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 MAPKAP1Q9BPZ7 522 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 CCDC3Q9BQI4 270 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 SEMA6CQ9H3T2 930 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 ERVMER34-1Q9H9K5 563 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 VPS4AQ9UN37 437 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 SNX8Q9Y5X2 465 aa12.63□□□□□ -0.39
UBA3-201ENST00000349511 IGHV5-51A0A0C4DH38 117 aa12.62□□□□□ -0.39
UBA3-201ENST00000349511 A0A1W2PS29 197 aa12.62□□□□□ -0.39
UBA3-201ENST00000349511 E9PQ18 207 aa12.62□□□□□ -0.39
UBA3-201ENST00000349511 RNASET2O00584 256 aaKnown RBP12.62□□□□□ -0.39
UBA3-201ENST00000349511 PCDHGA12O60330 932 aa12.62□□□□□ -0.39
UBA3-201ENST00000349511 ERAL1O75616 437 aaKnown RBP12.62□□□□□ -0.39
UBA3-201ENST00000349511 C8orf89P0DMQ9 161 aa12.62□□□□□ -0.39
UBA3-201ENST00000349511 ALPPL2P10696 532 aa12.62□□□□□ -0.39
UBA3-201ENST00000349511 CD36P16671 472 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms