RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 DCUN1D3Q8IWE4 304 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 FAM26EQ8N5C1 309 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 AMDHD1Q96NU7 426 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 DCLRE1CQ96SD1 692 aaKnown RBP17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 MENTQ9BUN1 341 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 NEUROD4Q9HD90 331 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 MARK1Q9P0L2 795 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 KLHL20Q9Y2M5 609 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 MTCL1Q9Y4B5 1905 aaKnown RBP17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 C4orf51C9J302 202 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 NDUFS4O43181 175 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 IDH3BO43837 385 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 CH25HO95992 272 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 CCL5P13501 91 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 SOX18P35713 384 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 CCR8P51685 355 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 FUT5Q11128 374 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 CCDC116Q8IYX3 515 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 MRPL43Q8N983 215 aaKnown RBP17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 CREB3L4Q8TEY5 395 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 SLC25A46Q96AG3 418 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 DIRAS2Q96HU8 199 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 TTYH2Q9BSA4 534 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 PLSCR3Q9NRY6 295 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 CNIH4Q9P003 139 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 IL20RAQ9UHF4 553 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 DNMT3AQ9Y6K1 912 aaPredicted RBP17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 LRRK1Q38SD2 2015 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 IGKV1-8A0A0C4DH67 115 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 PDE9AO76083 593 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 FRKP42685 505 aaPredicted RBP17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 CLCNKAP51800 687 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 NCBP2P52298 156 aaKnown RBP eCLIP17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 LHFPL3Q86UP9 236 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 GLCCI1Q86VQ1 547 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 MORN4Q8NDC4 146 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 TMCO6Q96DC7 493 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 SLC35G5Q96KT7 338 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 P2RX2Q9UBL9 471 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 MALT1Q9UDY8 824 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 GPR34Q9UPC5 381 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 NTNG1Q9Y2I2 539 aa17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 GPR55Q9Y2T6 319 aaPredicted RBP17.06■□□□□ 0.32
PTP4A3-202ENST00000349124 A0A1W2PRQ8 180 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 MEIOCA2RUB1 952 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 FAM47E-STBD1D6RA91 191 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 KIAA0355O15063 1070 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 FKTNO75072 461 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 CSF3P09919 207 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 HYAL2Q12891 473 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 C1DQ13901 141 aaKnown RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 GLYR1Q49A26 553 aaPredicted RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 ZNF544Q6NX49 715 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 PRICKLE2Q7Z3G6 844 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 RAB43Q86YS6 212 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 OR8D4Q8NGM9 314 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 HCAR2Q8TDS4 363 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 CHAC2Q8WUX2 184 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 FGF11Q92914 225 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 TRIM43Q96BQ3 446 aaPredicted RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 TOX2Q96NM4 488 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 PHOX2BQ99453 314 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 C11orf54Q9H0W9 315 aaPredicted RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 PCDHGB2Q9Y5G2 931 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 FABP12A6NFH5 140 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 EFNB1P98172 346 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 TBRG1Q3YBR2 411 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 CRTC2Q53ET0 693 aaPredicted RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 NUDT13Q86X67 352 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 TRIM48Q8IWZ4 208 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 OR5K2Q8NHB8 316 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 RGMAQ96B86 450 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 ZNF514Q96K75 400 aaPredicted RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 TRMT61BQ9BVS5 477 aaKnown RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 POLDIP3Q9BY77 421 aaKnown RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 DIMT1Q9UNQ2 313 aaKnown RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 OR1A2Q9Y585 309 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 NOX1Q9Y5S8 564 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 A0A087WUU8 490 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 IGLON5A6NGN9 336 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 TMCC2O75069 709 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 RAB36O95755 333 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 LALBAP00709 142 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 GNRH1P01148 92 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 HMGN2P05204 90 aaKnown RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 TSPAN19P0C672 248 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 SSR2P43308 183 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 CDK5Q00535 292 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 OR4C11Q6IEV9 310 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 GDPGP1Q6ZNW5 385 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 TRIM69Q86WT6 500 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 ZNF557Q8N988 423 aaPredicted RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 OR8K5Q8NH50 307 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 OR52P1PQ8NH57 321 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 FYTTD1Q96QD9 318 aaKnown RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 EQTNQ9NQ60 294 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 NUFIP1Q9UHK0 495 aaKnown RBP17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 IRAK3Q9Y616 596 aa17.05■□□□□ 0.32
PTP4A3-202ENST00000349124 MAN2A2P49641 1150 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 CSNK1G2P78368 415 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms