RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 GARNL3Q5VVW2 1013 aa17.7■□□□□ 0.42
UBE3C-201ENST00000348165 PSD4Q8NDX1 1056 aa17.7■□□□□ 0.42
UBE3C-201ENST00000348165 FUZQ9BT04 418 aa17.7■□□□□ 0.42
UBE3C-201ENST00000348165 TREX1Q9NSU2 369 aa17.7■□□□□ 0.42
UBE3C-201ENST00000348165 MED11Q9P086 117 aa17.7■□□□□ 0.42
UBE3C-201ENST00000348165 SEC14L4Q9UDX3 406 aa17.7■□□□□ 0.42
UBE3C-201ENST00000348165 CDH10Q9Y6N8 788 aa17.7■□□□□ 0.42
UBE3C-201ENST00000348165 HTR3EA5X5Y0 456 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 OTX2P32243 289 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 PRKCDQ05655 676 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 HNRNPA0Q13151 305 aaKnown RBP17.69■□□□□ 0.42
UBE3C-201ENST00000348165 RCAN2Q14206 197 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 FOXRED2Q8IWF2 684 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 LRR1Q96L50 414 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 SDR39U1Q9NRG7 319 aaPredicted RBP17.69■□□□□ 0.42
UBE3C-201ENST00000348165 PRAMEF26H0Y7S4 382 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 GRPRP30550 384 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 SPIN3Q5JUX0 258 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 TEX26Q8N6G2 289 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 ITPKCQ96DU7 683 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 SLC6A15Q9H2J7 730 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 TRPV4Q9HBA0 871 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 TIGARQ9NQ88 270 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 HEBP1Q9NRV9 189 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 IL20RAQ9UHF4 553 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 GPR89AB7ZAQ6 455 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 H7C2Y5 167 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 AK1P00568 194 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 GPR89BP0CG08 455 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 GGT1P19440 569 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 CDK3Q00526 305 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 KLHDC9Q8NEP7 349 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 CCDC107Q8WV48 283 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 AKAP1Q92667 903 aaKnown RBP eCLIP17.69■□□□□ 0.42
UBE3C-201ENST00000348165 S100A16Q96FQ6 103 aaKnown RBP17.69■□□□□ 0.42
UBE3C-201ENST00000348165 SORBS1Q9BX66 1292 aaKnown RBP17.69■□□□□ 0.42
UBE3C-201ENST00000348165 MROQ9BYG7 248 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 KIF13AQ9H1H9 1805 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 HSPA12AO43301 675 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 LRFN4Q6PJG9 635 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 SLC44A3Q8N4M1 653 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 SLC30A2Q9BRI3 323 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 VNN3Q9NY84 501 aa17.69■□□□□ 0.42
UBE3C-201ENST00000348165 SEC14L5O43304 696 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 FGF4P08620 206 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 STSP08842 583 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 H2BFMP0C1H6 154 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 PRKCAP17252 672 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 NADSYN1Q6IA69 706 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 OR4K5Q8NGD3 323 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 THAP4Q8WY91 577 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 CIDECQ96AQ7 238 aaPredicted RBP17.68■□□□□ 0.42
UBE3C-201ENST00000348165 PELI2Q9HAT8 420 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 PADI2Q9Y2J8 665 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 HSPB11Q9Y547 144 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 A6NCN8 305 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 MT-ND2P03891 347 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 NDUFV2P19404 249 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 ENDOUP21128 410 aaKnown RBP17.68■□□□□ 0.42
UBE3C-201ENST00000348165 CLCA4Q14CN2 919 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 ALG10BQ5I7T1 473 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 PDZD3Q86UT5 571 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 ZNF285Q96NJ3 590 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 SLC22A12Q96S37 553 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 METTL8Q9H825 291 aaKnown RBP17.68■□□□□ 0.42
UBE3C-201ENST00000348165 FARSAQ9Y285 508 aaKnown RBP17.68■□□□□ 0.42
UBE3C-201ENST00000348165 SEC23BQ15437 767 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 COQ5Q5HYK3 327 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 NETO1Q8TDF5 533 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 HS6ST2Q96MM7 605 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 BEX2Q9BXY8 128 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 BEX1Q9HBH7 125 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 STARD5Q9NSY2 213 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 TAS2R10Q9NYW0 307 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 ACTR10Q9NZ32 417 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 HSD17B1P14061 328 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 EN2P19622 333 aaPredicted RBP17.68■□□□□ 0.42
UBE3C-201ENST00000348165 HOXD9P28356 352 aaPredicted RBP17.68■□□□□ 0.42
UBE3C-201ENST00000348165 CDKL1Q00532 357 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 PIGGQ5H8A4 983 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 NEIL3Q8TAT5 605 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 C15orf40Q8WUR7 153 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 NXPE2Q96DL1 559 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 MEMO1Q9Y316 297 aa17.68■□□□□ 0.42
UBE3C-201ENST00000348165 GXYLT2A0PJZ3 443 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 GPR37L1O60883 481 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 MAGEA6P43360 314 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 CAPZA1P52907 286 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 MAB21L1Q13394 359 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 RPS26P11Q5JNZ5 115 aaPredicted RBP17.67■□□□□ 0.42
UBE3C-201ENST00000348165 PNCKQ6P2M8 343 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 FBXO27Q8NI29 283 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 ALOXE3Q9BYJ1 711 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 ARNT2Q9HBZ2 717 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 ENAMQ9NRM1 1142 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 KCMF1Q9P0J7 381 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 PLOD2O00469 737 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 DHRS4L1P0CG22 281 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 PTGER1P34995 402 aa17.67■□□□□ 0.42
UBE3C-201ENST00000348165 ADAMTSL3P82987 1691 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms