RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 OTOGLQ3ZCN5 2332 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 ASCC3Q8N3C0 2202 aaKnown RBP10.26□□□□□ -0.77
ECM1-201ENST00000346569 IGLV3-12A0A075B6K2 115 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 CLOCKO15516 846 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 ASNA1O43681 348 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 TIAF1O95411 115 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 FCGR1AP12314 374 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 ZNF26P17031 533 aaPredicted RBP10.26□□□□□ -0.77
ECM1-201ENST00000346569 NT5EP21589 574 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 PEX2P28328 305 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 PDX1P52945 283 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 STX4Q12846 297 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 SLC13A2Q13183 592 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 SERTAD2Q14140 314 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 TRIP10Q15642 601 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 ATP6AP1Q15904 470 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 LRRC23Q53EV4 343 aaPredicted RBP10.26□□□□□ -0.77
ECM1-201ENST00000346569 CYBRD1Q53TN4 286 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 ZNF385CQ66K41 422 aaPredicted RBP10.26□□□□□ -0.77
ECM1-201ENST00000346569 PWWP2BQ6NUJ5 590 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 MFSD12Q6NUT3 480 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 CDC73Q6P1J9 531 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 ZCCHC12Q6PEW1 402 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 QSOX2Q6ZRP7 698 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 PATL1Q86TB9 770 aaKnown RBP10.26□□□□□ -0.77
ECM1-201ENST00000346569 KBTBD2Q8IY47 623 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 BMPERQ8N8U9 685 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 OR5D16Q8NGK9 328 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 OR10Q1Q8NGQ4 319 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 TAMM41Q96BW9 452 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 SLC47A1Q96FL8 570 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 CENPNQ96H22 339 aaPredicted RBP10.26□□□□□ -0.77
ECM1-201ENST00000346569 RBM18Q96H35 190 aaKnown RBP10.26□□□□□ -0.77
ECM1-201ENST00000346569 TMEM19Q96HH6 336 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 OR7D2Q96RA2 312 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 YIPF4Q9BSR8 244 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 RBCK1Q9BYM8 510 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 KLHL4Q9C0H6 718 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 TGIF2Q9GZN2 237 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 SEMA6AQ9H2E6 1030 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 YY1AP1Q9H869 796 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 BCL2L10Q9HD36 194 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 IL1RAPQ9NPH3 570 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 TMEM9BQ9NQ34 198 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 SEMA4GQ9NTN9 838 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 GIN1Q9NXP7 522 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 FTSJ1Q9UET6 329 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 CNOT11Q9UKZ1 510 aaKnown RBP10.26□□□□□ -0.77
ECM1-201ENST00000346569 RARRES3Q9UL19 164 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 MMACHCQ9Y4U1 282 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 ADAMTS20P59510 1910 aa10.26□□□□□ -0.77
ECM1-201ENST00000346569 EP300Q09472 2414 aaPredicted RBP10.26□□□□□ -0.77
ECM1-201ENST00000346569 IGKV3D-11A0A0A0MRZ8 115 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 DUXAA6NLW8 204 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 ACOX3O15254 700 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 TPST1O60507 370 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 LRP3O75074 770 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 NME6O75414 186 aaPredicted RBP10.25□□□□□ -0.77
ECM1-201ENST00000346569 CDC123O75794 336 aaPredicted RBP10.25□□□□□ -0.77
ECM1-201ENST00000346569 MFN2O95140 757 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 CBX7O95931 251 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 RECKO95980 971 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 AQP1P29972 269 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 CSTF2P33240 577 aaKnown RBP eCLIP10.25□□□□□ -0.77
ECM1-201ENST00000346569 STT3AP46977 705 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 KHKP50053 298 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 ANXA11P50995 505 aaKnown RBP10.25□□□□□ -0.77
ECM1-201ENST00000346569 EFNA3P52797 238 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 KCNJ10P78508 379 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 MC2RQ01718 297 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 SPEM2Q0P670 501 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 FUT5Q11128 374 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 DUSP8Q13202 625 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 IL11RAQ14626 422 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 CSRP2Q16527 193 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 LRRC36Q1X8D7 754 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.25□□□□□ -0.77
ECM1-201ENST00000346569 SFT2D3Q587I9 215 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 PHF19Q5T6S3 580 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 PRAMEF8Q5VWM4 474 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 PRAMEF7Q5VXH5 474 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 HEPHL1Q6MZM0 1159 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 PPP4R4Q6NUP7 873 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 FKBP9P1Q75LS8 142 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 COX15Q7KZN9 410 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 PIWIL3Q7Z3Z3 882 aaKnown RBP10.25□□□□□ -0.77
ECM1-201ENST00000346569 TSEN54Q7Z6J9 526 aaKnown RBP10.25□□□□□ -0.77
ECM1-201ENST00000346569 VTCN1Q7Z7D3 282 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 NAXDQ8IW45 347 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 SLC16A11Q8NCK7 471 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 AGBL5Q8NDL9 886 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 PLPP5Q8NEB5 264 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 C7orf57Q8NEG2 295 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 DOK4Q8TEW6 326 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 MS4A4EQ96PG1 132 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 SLC29A1Q99808 456 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 TACO1Q9BSH4 297 aaKnown RBP10.25□□□□□ -0.77
ECM1-201ENST00000346569 DOHHQ9BU89 302 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 PIGUQ9H490 435 aa10.25□□□□□ -0.77
ECM1-201ENST00000346569 RUBCNLQ9H714 662 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms