RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CNOT4O95628 575 aaKnown RBP22.02■■□□□ 1.12
NPAS3-201ENST00000346562 UCHL1P09936 223 aa22.02■■□□□ 1.12
NPAS3-201ENST00000346562 LEG1Q6P5S2 330 aa22.02■■□□□ 1.12
NPAS3-201ENST00000346562 FGL1Q08830 312 aa22.02■■□□□ 1.12
NPAS3-201ENST00000346562 PLGLAQ15195 96 aa22.02■■□□□ 1.12
NPAS3-201ENST00000346562 HUS1BQ8NHY5 278 aa22.02■■□□□ 1.12
NPAS3-201ENST00000346562 TBC1D15Q8TC07 691 aa22.02■■□□□ 1.12
NPAS3-201ENST00000346562 NSUN5Q96P11 429 aaKnown RBP22.02■■□□□ 1.12
NPAS3-201ENST00000346562 GHRLQ9UBU3 117 aa22.02■■□□□ 1.12
NPAS3-201ENST00000346562 PRKYO43930 277 aa22.02■■□□□ 1.11
NPAS3-201ENST00000346562 FDXRP22570 491 aa22.02■■□□□ 1.11
NPAS3-201ENST00000346562 NR0B2Q15466 257 aa22.02■■□□□ 1.11
NPAS3-201ENST00000346562 LRRC37A5PQ49AS3 106 aa22.02■■□□□ 1.11
NPAS3-201ENST00000346562 PIGGQ5H8A4 983 aa22.02■■□□□ 1.11
NPAS3-201ENST00000346562 SPTSSAQ969W0 71 aa22.02■■□□□ 1.11
NPAS3-201ENST00000346562 TPSD1Q9BZJ3 242 aa22.02■■□□□ 1.11
NPAS3-201ENST00000346562 AIG1Q9NVV5 245 aa22.02■■□□□ 1.11
NPAS3-201ENST00000346562 SOBPA7XYQ1 873 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 CD40LGP29965 261 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 PIAS4Q8N2W9 510 aaPredicted RBP22.01■■□□□ 1.11
NPAS3-201ENST00000346562 OR8K5Q8NH50 307 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 REV1Q9UBZ9 1251 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 I3L521 148 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 TGM5O43548 720 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 SLC10A3P09131 477 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 ELK4P28324 431 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 EEF1A1P5Q5VTE0 462 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 CKMT1AP12532 417 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 CD97P48960 835 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 PPA1Q15181 289 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 UNC50Q53HI1 259 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 PSAPL1Q6NUJ1 521 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 ELMOD2Q8IZ81 293 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 OR10T2Q8NGX3 314 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 ZNF420Q8TAQ5 688 aaPredicted RBP22.01■■□□□ 1.11
NPAS3-201ENST00000346562 ATXN7L1Q9ULK2 861 aaPredicted RBP22.01■■□□□ 1.11
NPAS3-201ENST00000346562 ANHXE9PGG2 379 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 LRRTM2O43300 516 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 MFSD13AQ14CX5 517 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 KLHDC8AQ8IYD2 350 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 CENPSQ8N2Z9 138 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 CNIH3Q8TBE1 160 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 MAP3K3Q99759 626 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 ACTRT3Q9BYD9 372 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 TMEM59LQ9UK28 342 aa22.01■■□□□ 1.11
NPAS3-201ENST00000346562 TRIM46Q7Z4K8 759 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 DDX1Q92499 740 aaKnown RBP22■■□□□ 1.11
NPAS3-201ENST00000346562 PLEKHA3Q9HB20 300 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 PHLPP1O60346 1717 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 ZNF623O75123 536 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 DNAJB5O75953 348 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 PROS1P07225 676 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 ZNF43P17038 809 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 HNRNPA2B1P22626 353 aaKnown RBP22■■□□□ 1.11
NPAS3-201ENST00000346562 TMBIM6P55061 237 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 BTBD16Q32M84 506 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 FAM182AQ5T1J6 154 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 RELL1Q8IUW5 271 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 IGDCC3Q8IVU1 814 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 CREB3L4Q8TEY5 395 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 GATAD2BQ8WXI9 593 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 TRIM64CA6NLI5 447 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 OR52E2Q8NGJ4 325 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 ZNF182P17025 639 aaPredicted RBP22■■□□□ 1.11
NPAS3-201ENST00000346562 CDK2P24941 298 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 APLNRP35414 380 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 KANK2Q63ZY3 851 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 NAALAD2Q9Y3Q0 740 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 SDC3O75056 442 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 SPINT3P49223 89 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 TMEM205Q6UW68 189 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 RPLP0P6Q8NHW5 317 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 MAFIPQ8WZ33 124 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 ZFYVE21Q9BQ24 234 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 TMEM165Q9HC07 324 aa22■■□□□ 1.11
NPAS3-201ENST00000346562 PAK1IP1Q9NWT1 392 aaPredicted RBP22■■□□□ 1.11
NPAS3-201ENST00000346562 SSX5O60225 188 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 SERTAD2Q14140 314 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 GRB7Q14451 532 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 TCEAL1Q15170 157 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 AWAT2Q6E213 333 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 APCDD1Q8J025 514 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 FIBINQ8TAL6 211 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 NELL2Q99435 816 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 CD207Q9UJ71 328 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 STUB1Q9UNE7 303 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 PYCR1P32322 319 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 SHFQ7M4L6 423 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 GPRIN1Q7Z2K8 1008 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 MTHFD2LQ9H903 347 aaPredicted RBP21.99■■□□□ 1.11
NPAS3-201ENST00000346562 MAGED1Q9Y5V3 778 aaPredicted RBP21.99■■□□□ 1.11
NPAS3-201ENST00000346562 EFCAB7A8K855 629 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 C7P10643 843 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 DRD1P21728 446 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 RPS3P23396 243 aaKnown RBP eCLIP21.99■■□□□ 1.11
NPAS3-201ENST00000346562 GPR4P46093 362 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 NKX3-2P78367 333 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 TMEM53Q6P2H8 277 aa21.99■■□□□ 1.11
NPAS3-201ENST00000346562 TMEM173Q86WV6 379 aaPredicted RBP21.99■■□□□ 1.11
NPAS3-201ENST00000346562 RANBP3Q9H6Z4 567 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms