RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 PROX2Q3B8N5 592 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 MANEAQ5SRI9 462 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 C6orf132Q5T0Z8 1188 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 GPR107Q5VW38 600 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ENTHD1Q8IYW4 607 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SHISA5Q8N114 240 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 AQP11Q8NBQ7 271 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 OR7G2Q8NG99 324 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 GTPBP3Q969Y2 492 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 CCDC3Q9BQI4 270 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SPATA5L1Q9BVQ7 753 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 CCDC90BQ9GZT6 254 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 LYRM4Q9HD34 91 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 FAM60AQ9NP50 221 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 STARD5Q9NSY2 213 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 NAALAD2Q9Y3Q0 740 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SNX5Q9Y5X3 404 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ABCA7Q8IZY2 2146 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 A0A0G2JPF8 293 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 TRBV4-1A0A0J9YWV2 114 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ARRDC5A6NEK1 342 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 HNRNPCL2B2RXH8 293 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 HNRNPCL3B7ZW38 293 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 FAM227AF5H4B4 570 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SOX1O00570 391 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ASNA1O43681 348 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 WBP4O75554 376 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 HNRNPCL4P0DMR1 293 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 NME1P15531 152 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 CBLP22681 906 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 DCKP27707 260 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 GGT2P36268 569 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ELOCQ15369 112 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 FGD3Q5JSP0 725 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ZNF770Q6IQ21 691 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 FAM111BQ6SJ93 734 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 USP53Q70EK8 1073 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 WDR53Q7Z5U6 358 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 OR5T3Q8NGG3 340 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 C12orf43Q96C57 262 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 BTBD2Q9BX70 525 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ACTRT3Q9BYD9 372 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 LHPPQ9H008 270 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 QRSL1Q9H0R6 528 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SEMA6CQ9H3T2 930 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 PRDM9Q9NQV7 894 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SCN3BQ9NY72 215 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 FBXL21Q9UKT6 434 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 TPRKBQ9Y3C4 175 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 M0R3H8 397 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SEC14L2O76054 403 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 GASTP01350 101 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 STARD6P59095 220 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SLC35A2P78381 396 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ID2Q02363 134 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 DEFB110Q30KQ9 67 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 LEXMQ3ZCV2 418 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 GTF2IRD2BQ6EKJ0 949 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 GTF2IRD2Q86UP8 949 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ERI1Q8IV48 349 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ZNF420Q8TAQ5 688 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 MIR1-1HGQ9H1L0 117 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 DUSP21Q9H596 190 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 NTMQ9P121 344 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ACAD8Q9UKU7 415 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 TMCC3Q9ULS5 477 aa13.25□□□□□ -0.29
CDK5RAP1-202ENST00000346416 TLR4O00206 839 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 GALR3O60755 368 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 LDB3O75112 727 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 UBXN7O94888 489 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 EPPINO95925 133 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 H1F0P07305 194 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 CPMP14384 443 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 CDH3P22223 829 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ELAVL4P26378 380 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 KRT20P35900 424 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 RACK1P63244 317 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 RPL6Q02878 288 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 PIN1Q13526 163 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SEC23BQ15437 767 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 PRAMEF8Q5VWM4 474 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 PRAMEF7Q5VXH5 474 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SIX5Q8N196 739 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 OR2L13Q8N349 312 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 PARP8Q8N3A8 854 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ARL14Q8N4G2 192 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SLC16A11Q8NCK7 471 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ZNF540Q8NDQ6 660 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SIMC1Q8NDZ2 872 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 CADM4Q8NFZ8 388 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 FAM81AQ8TBF8 368 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 LMX1AQ8TE12 382 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 APH1BQ8WW43 257 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 CNDP2Q96KP4 475 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 DHRS1Q96LJ7 313 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 MS4A4EQ96PG1 132 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 RHNO1Q9BSD3 238 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 NAA50Q9GZZ1 169 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SLC38A1Q9H2H9 487 aa13.24□□□□□ -0.29
CDK5RAP1-202ENST00000346416 CHRDQ9H2X0 955 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms