RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 KLK1P06870 262 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 SNRPB2P08579 225 aaKnown RBP14.9□□□□□ -0.02
RAB5C-201ENST00000346213 CT62P0C5K7 136 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 IDO1P14902 403 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 TRHRP34981 398 aaPredicted RBP14.9□□□□□ -0.02
RAB5C-201ENST00000346213 RAE1P78406 368 aaKnown RBP14.9□□□□□ -0.02
RAB5C-201ENST00000346213 TRMT5Q32P41 509 aaKnown RBP14.9□□□□□ -0.02
RAB5C-201ENST00000346213 C6orf163Q5TEZ5 329 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 Q6ZSR9 355 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 SIAH3Q8IW03 269 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 LGI4Q8N135 537 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 METTL4Q8N3J2 472 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 OR2T11Q8NH01 316 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 VMP1Q96GC9 406 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 CLPTM1LQ96KA5 538 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 UTP23Q9BRU9 249 aaKnown RBP14.9□□□□□ -0.02
RAB5C-201ENST00000346213 DEFB126Q9BYW3 111 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 ACPTQ9BZG2 426 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 OLAHQ9NV23 265 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 LRFN1Q9P244 771 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 GIMAP2Q9UG22 337 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 PRPF19Q9UMS4 504 aaKnown RBP14.9□□□□□ -0.02
RAB5C-201ENST00000346213 SPTAN1Q13813 2472 aaKnown RBP14.9□□□□□ -0.02
RAB5C-201ENST00000346213 WWP2O00308 870 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 ENTPD5O75356 428 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 OR2J2O76002 312 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 OR6B1O95007 311 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 SEMA3DO95025 777 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 RFC3P40938 356 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 STT3AP46977 705 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 CLCN2P51788 898 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 ERVK-8P63133 956 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 HMGCS1Q01581 520 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 KPNB1Q14974 876 aaKnown RBP14.9□□□□□ -0.02
RAB5C-201ENST00000346213 PRSS53Q2L4Q9 553 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 FAM180AQ6UWF9 173 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 FGD2Q7Z6J4 655 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 NUDT13Q86X67 352 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 FUNDC1Q8IVP5 155 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 PGAM4Q8N0Y7 254 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 MIER2Q8N344 545 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 WDR60Q8WVS4 1066 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 REPS1Q96D71 796 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 SLC29A3Q9BZD2 475 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 RNPEPL1Q9HAU8 725 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 PRM3Q9NNZ6 103 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 SDR39U1Q9NRG7 319 aaPredicted RBP14.9□□□□□ -0.02
RAB5C-201ENST00000346213 AIG1Q9NVV5 245 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 CCDC167Q9P0B6 97 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 TEKT2Q9UIF3 430 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 CES1P1Q9UKY3 287 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 MRPS33Q9Y291 106 aaKnown RBP14.9□□□□□ -0.02
RAB5C-201ENST00000346213 GPR45Q9Y5Y3 372 aa14.9□□□□□ -0.02
RAB5C-201ENST00000346213 POLEQ07864 2286 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 CROCCQ5TZA2 2017 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 RP1L1Q8IWN7 2480 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-201ENST00000346213 ASPDHA6ND91 283 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 NME2P1O60361 137 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 SLC25A12O75746 678 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 RASAL1O95294 804 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 NADKO95544 446 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-201ENST00000346213 SP1P08047 785 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 NR2F6P10588 404 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 NME2P22392 152 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 AP2B1P63010 937 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 OC90Q02509 493 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-201ENST00000346213 STX4Q12846 297 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 DUSP8Q13202 625 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 ART3Q13508 389 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 C6orf136Q5SQH8 315 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 PAOXQ6QHF9 649 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 LYPD8Q6UX82 237 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-201ENST00000346213 C1orf52Q8N6N3 182 aaKnown RBP14.89□□□□□ -0.03
RAB5C-201ENST00000346213 BCORP1Q8N888 145 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 TSPEARQ8WU66 669 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 SELENOMQ8WWX9 145 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 C11orf24Q96F05 449 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-201ENST00000346213 SENP5Q96HI0 755 aaPredicted RBP14.89□□□□□ -0.03
RAB5C-201ENST00000346213 RASL10BQ96S79 203 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 SERPINI1Q99574 410 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 DCLRE1BQ9H816 532 aa14.89□□□□□ -0.03
RAB5C-201ENST00000346213 LDLRP01130 860 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 EDN3P14138 238 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 SOX3P41225 446 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 HLCSP50747 726 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 ARFIP1P53367 373 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 TAS2R50P59544 299 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 HSF1Q00613 529 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 SMU1Q2TAY7 513 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 ATP6AP1LQ52LC2 224 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 DOPEY1Q5JWR5 2465 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 FBXW8Q8N3Y1 598 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 TM4SF18Q96CE8 201 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 APIPQ96GX9 242 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 BRINP2Q9C0B6 783 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 ELOVL6Q9H5J4 265 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 TMEM45AQ9NWC5 275 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 ABI3Q9P2A4 366 aa14.88□□□□□ -0.03
RAB5C-201ENST00000346213 PHF11Q9UIL8 331 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms