RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ERVMER34-1Q9H9K5 563 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 PHPT1Q9NRX4 125 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 SLAMF8Q9P0V8 285 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF208O43345 1280 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 NDUFV2P19404 249 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 MAOAP21397 527 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 RAP2BP61225 183 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 RPS27AP62979 156 aaKnown RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 UBA52P62987 128 aaKnown RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 TREML2Q5T2D2 321 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 LIPJQ5W064 366 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 TTLQ8NG68 377 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 OR7G3Q8NG95 312 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 OR51A7Q8NH64 312 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 HMGB4Q8WW32 186 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ST8SIA4Q92187 359 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ELP4Q96EB1 424 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 FN3KQ9H479 309 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 NOX3Q9HBY0 568 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 TAC3Q9UHF0 121 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 MYH3P11055 1940 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 MRC1P22897 1456 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 RFXAPO00287 272 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 SLC43A1O75387 559 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 MAS1P04201 325 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 PPP3CBP16298 524 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 GPR4P46093 362 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ACTA2P62736 377 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ACTG2P63267 376 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 SELENOWP63302 87 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 SIGIRRQ6IA17 410 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 LETMD1Q6P1Q0 360 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 PLBD1Q6P4A8 553 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 SLC46A3Q7Z3Q1 461 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 OSTM1Q86WC4 334 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 OR6N2Q8NGY6 317 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 WDR26Q9H7D7 661 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 hCG_1807616A0A1W2PRN6 198 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF705FA8MVS1 300 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF705DP0CH99 300 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF705BP0CI00 300 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 TRAPPC2P0DI81 140 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 TRAPPC2BP0DI82 140 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 TPT1P13693 172 aaKnown RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 MAGEA3P43357 314 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 CAPZA1P52907 286 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ACTBP60709 375 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ACTG1P63261 375 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 GNMTQ14749 295 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 PAN3Q58A45 887 aaKnown RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 MS4A13Q5J8X5 152 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 OR5P2Q8WZ92 322 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 SMOQ99835 787 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 NIT2Q9NQR4 276 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 TUBG2Q9NRH3 451 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ADARB2Q9NS39 739 aaKnown RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 LDB2O43679 373 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 LAMP1P11279 417 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 CXCR1P25024 350 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 Q6ZPB1 254 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 GPR149Q86SP6 731 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 DNAJC22Q8N4W6 341 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF300Q96RE9 604 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 CRTAC1Q9NQ79 661 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 RASD1Q9Y272 281 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 CLDN4O14493 209 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 SCAMP2O15127 329 aaKnown RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 PRAMEF11O60813 436 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 SLC34A2O95436 690 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 HCKP08631 526 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 ITGA5P08648 1049 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 OR8U9P0C7N5 309 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 BMP1P13497 986 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 MEF2AQ02078 507 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 MLLT11Q13015 90 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 MBTPS1Q14703 1052 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 SYT6Q5T7P8 510 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 CHST9Q7L1S5 443 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 GDPD3Q7L5L3 318 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 LRRC28Q86X40 367 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 NAGSQ8N159 534 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 HEBP1Q9NRV9 189 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 FBXL21Q9UKT6 434 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 TMPRSS11EQ9UL52 423 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 HRH3Q9Y5N1 445 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 ARNTLO00327 626 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 HOXC11O43248 304 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 PTHP01270 115 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 CLUP10909 449 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 JUPP14923 745 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 UGT2B7P16662 529 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 APEX1P27695 318 aaKnown RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 ENPP2Q13822 863 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 PEA15Q15121 130 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 TCTE1Q5JU00 501 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 HACD4Q5VWC8 232 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 RBM23Q86U06 439 aaKnown RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 PDZD3Q86UT5 571 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 PNPLA1Q8N8W4 532 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms