RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 LTB4RQ15722 352 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 SLX4IPQ5VYV7 408 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 LINC00299Q6ZSB3 139 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 SLC22A16Q86VW1 577 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 OR4K5Q8NGD3 323 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 CDADC1Q9BWV3 514 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 RAB11FIP5Q9BXF6 653 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 MIR1-1HGQ9H1L0 117 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 MMP27Q9H306 513 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 CNOT2Q9NZN8 540 aaKnown RBP14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 SLC9A8Q9Y2E8 581 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 SCN3AQ9NY46 2000 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 POM121BA6NF01 834 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 K7EQS6 105 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 CACNB4O00305 520 aaPredicted RBP14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 BTN3A3O00478 584 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 TLX2O43763 284 aaPredicted RBP14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 ASGR2P07307 311 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 MMP11P24347 488 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 ADPRHP54922 357 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 SNRPNP63162 240 aaKnown RBP14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 BTN3A2P78410 334 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 SLC13A2Q13183 592 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 TJAP1Q5JTD0 557 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 TPRG1LQ5T0D9 272 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 PAQR6Q6TCH4 344 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 CYP4Z2PQ8N1L4 340 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 KCT2Q8NC54 265 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 OR2L5Q8NG80 312 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 C9orf43Q8TAL5 461 aaPredicted RBP14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 DHRS1Q96LJ7 313 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 GPA33Q99795 319 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 TSSK6Q9BXA6 273 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 EHD3Q9NZN3 535 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D29Q9UFV1 150 aa14.03□□□□□ -0.16
VIPAS39-202ENST00000343765 EPOPA6NHQ4 379 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 H0Y8X5 98 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 APOL3O95236 402 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 EIF2DP41214 584 aaKnown RBP14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 GSTM5P46439 218 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 PPP5CP53041 499 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 ZNF91Q05481 1191 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 AGERQ15109 404 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 SSX1Q16384 188 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 ZER1Q7Z7L7 766 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 TRIM73Q86UV7 250 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 ZG16BQ96DA0 208 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 C6orf106Q9H6K1 298 aaPredicted RBP14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 CD93Q9NPY3 652 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 MAN2C1Q9NTJ4 1040 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 ZNF229Q9UJW7 825 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 ACAD8Q9UKU7 415 aa14.02□□□□□ -0.16
VIPAS39-202ENST00000343765 AGAP5A6NIR3 686 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 CCRL2O00421 344 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 PRKYO43930 277 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 GTF2E2P29084 291 aaKnown RBP14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 CMPK1P30085 196 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 KIR2DL1P43626 348 aaPredicted RBP14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 SLC15A1P46059 708 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 SMIM11AP58511 58 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 HOXC5Q00444 222 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 ENPP2Q13822 863 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 INAVAQ3KP66 663 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 PLEKHG7Q6ZR37 379 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 FAM83FQ8NEG4 500 aaPredicted RBP14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 CCL4L1Q8NHW4 92 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 BBS10Q8TAM1 723 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 LCN9Q8WX39 176 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 KLHL6Q8WZ60 621 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 COL26A1Q96A83 441 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 ZNF764Q96H86 408 aaPredicted RBP14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 SLC6A18Q96N87 628 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 KCNS3Q9BQ31 491 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 SLC25A19Q9HC21 320 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 PCDHGA4Q9Y5G9 962 aa14.02□□□□□ -0.17
VIPAS39-202ENST00000343765 WWP2O00308 870 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 PLRG1O43660 514 aaKnown RBP14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 PRICKLE3O43900 615 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 PTNP21246 168 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 TGM1P22735 817 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 CD97P48960 835 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 TMEM196Q5HYL7 178 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 C12orf73Q69YU5 71 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 SYCE2Q6PIF2 218 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 DOK4Q8TEW6 326 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 HTRA1Q92743 480 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 OPALINQ96PE5 141 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 FUZQ9BT04 418 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 CNPPD1Q9BV87 410 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 KLHL25Q9H0H3 589 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 ZSCAN32Q9NX65 697 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 MDC1Q14676 2089 aaKnown RBP14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 A0A1W2PRQ8 180 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 PRSS38A1L453 326 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 TP53P04637 393 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 FHP07954 510 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 F3P13726 295 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 PORP16435 677 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 CSNK2A2P19784 350 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 S100A5P33763 92 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms