RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 OR4C15Q8NGM1 316 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 RORBQ92753 470 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 KAT2AQ92830 837 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 COL26A1Q96A83 441 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 MOAP1Q96BY2 351 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 C16orf58Q96GQ5 468 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 KCMF1Q9P0J7 381 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 RHCGQ9UBD6 479 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 PCDHGA10Q9Y5H3 936 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 CSF2P04141 144 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 RNF44Q7L0R7 432 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 PRSS41Q7RTY9 318 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 CROCCP3Q8IVE0 287 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 RBM12BQ8IXT5 1001 aaKnown RBP17.49■□□□□ 0.39
HOXA9-201ENST00000343483 LGI4Q8N135 537 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 SLC5A8Q8N695 610 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 ZNF655Q8N720 491 aaPredicted RBP17.49■□□□□ 0.39
HOXA9-201ENST00000343483 TANKQ92844 425 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 UBE2FQ969M7 185 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 ELP4Q96EB1 424 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 SHDQ96IW2 340 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 C10orf90Q96M02 699 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 CCDC3Q9BQI4 270 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 C3orf14Q9HBI5 128 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 TMEM74BQ9NUR3 256 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 ENPP5Q9UJA9 477 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 DAPP1Q9UN19 280 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 DOLKQ9UPQ8 538 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 STK25O00506 426 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 ZSCAN9O15535 394 aaPredicted RBP17.49■□□□□ 0.39
HOXA9-201ENST00000343483 EMC8O43402 210 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 MAN1A2O60476 641 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 SERPINB7O75635 380 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 RHCEP18577 417 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 NR4A1P22736 598 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 TLX1P31314 330 aaPredicted RBP17.49■□□□□ 0.39
HOXA9-201ENST00000343483 KRT20P35900 424 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 MAP2K4P45985 399 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 VSX2P58304 361 aaPredicted RBP17.49■□□□□ 0.39
HOXA9-201ENST00000343483 STARD6P59095 220 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 RELAQ04206 551 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 ELOCQ15369 112 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 CEBPEQ15744 281 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 PROX2Q3B8N5 592 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 SLC16A12Q6ZSM3 486 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 OR4N5Q8IXE1 308 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 LRRC25Q8N386 305 aaPredicted RBP17.49■□□□□ 0.39
HOXA9-201ENST00000343483 CSNK1A1LQ8N752 337 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 NUP43Q8NFH3 380 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 LMX1AQ8TE12 382 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 PHF10Q8WUB8 498 aaKnown RBP17.49■□□□□ 0.39
HOXA9-201ENST00000343483 HRASLS5Q96KN8 279 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 RHNO1Q9BSD3 238 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 RSPO3Q9BXY4 272 aaPredicted RBP17.49■□□□□ 0.39
HOXA9-201ENST00000343483 STARD5Q9NSY2 213 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 RLIMQ9NVW2 624 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 ETAA1Q9NY74 926 aa17.49■□□□□ 0.39
HOXA9-201ENST00000343483 E9PQ18 207 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 RGS10O43665 173 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 GADD45GO95257 159 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 PDGFBP01127 241 aaPredicted RBP17.48■□□□□ 0.39
HOXA9-201ENST00000343483 NME1P15531 152 aaKnown RBP17.48■□□□□ 0.39
HOXA9-201ENST00000343483 FUT4P22083 530 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 XKP51811 444 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 CRISP3P54108 245 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 MICAQ29983 383 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 KRT73Q86Y46 540 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 ANKRD13BQ86YJ7 626 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 OR4K14Q8NGD5 310 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 VANGL1Q8TAA9 524 aaPredicted RBP17.48■□□□□ 0.39
HOXA9-201ENST00000343483 APOBEC4Q8WW27 367 aaKnown RBP17.48■□□□□ 0.39
HOXA9-201ENST00000343483 CCNB1IP1Q9NPC3 277 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 ACER3Q9NUN7 267 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 WNT16Q9UBV4 365 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 POMT2Q9UKY4 750 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 PCDHGA6Q9Y5G7 932 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 A0A1W2PR77 199 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 TLR4O00206 839 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 PCDHGA12O60330 932 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 BCAS1O75363 584 aaPredicted RBP17.48■□□□□ 0.39
HOXA9-201ENST00000343483 NME6O75414 186 aaPredicted RBP17.48■□□□□ 0.39
HOXA9-201ENST00000343483 WBP4O75554 376 aaKnown RBP17.48■□□□□ 0.39
HOXA9-201ENST00000343483 MT-ND2P03891 347 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 ST6GAL1P15907 406 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 GSSP48637 474 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 ZXDAP98168 799 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 DEFB110Q30KQ9 67 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 CCDC81Q6ZN84 652 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 Q6ZPB1 254 aaPredicted RBP17.48■□□□□ 0.39
HOXA9-201ENST00000343483 HMGN2P46Q86SG4 172 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 ENTHD1Q8IYW4 607 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 RASSF5Q8WWW0 418 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 MS4A12Q9NXJ0 267 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 SLC22A7Q9Y694 548 aa17.48■□□□□ 0.39
HOXA9-201ENST00000343483 GON4LQ3T8J9 2241 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 KNL1Q8NG31 2342 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 PCDH17O14917 1159 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 HCRTR1O43613 425 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 UBXN7O94888 489 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 CHRM4P08173 479 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms