RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 NCR1O76036 304 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 SLCO2B1O94956 709 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 RBMS1P29558 406 aaKnown RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 SOX18P35713 384 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 CD79BP40259 229 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 NNMTP40261 264 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 OR1G1P47890 313 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 RFX3P48380 749 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 GBX2P52951 348 aaPredicted RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 ACLYP53396 1101 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 RAG2P55895 527 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF267Q14586 743 aaPredicted RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 SNAPC1Q16533 368 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 CCL15Q16663 113 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 LGALSLQ3ZCW2 172 aaPredicted RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 RPS26P11Q5JNZ5 115 aaPredicted RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 EOGTQ5NDL2 527 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 NDUFAF5Q5TEU4 345 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 CCSAPQ6IQ19 270 aaPredicted RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 AGTRAPQ6RW13 159 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 SERPINA13PQ6UXR4 307 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 TMEM91Q6ZNR0 172 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 TPRG1Q6ZUI0 275 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 LRRC28Q86X40 367 aaPredicted RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 OR8K5Q8NH50 307 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 C2orf15Q8WU43 125 aaKnown RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 SLC38A5Q8WUX1 472 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 WBP2Q969T9 261 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 OTULINQ96BN8 352 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 NEURL3Q96EH8 262 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 WDR34Q96EX3 536 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF354BQ96LW1 612 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 FAM83CQ9BQN1 747 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF649Q9BS31 505 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 OR51J1Q9H342 316 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 EXTL2Q9UBQ6 330 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 A4GNTQ9UNA3 340 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 PRG3Q9Y2Y8 225 aaPredicted RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 CACNG2Q9Y698 323 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 CSNK1G3Q9Y6M4 447 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 A0A1W2PRB8 838 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 CASC3O15234 703 aaKnown RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 SGTAO43765 313 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 NME6O75414 186 aaPredicted RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 CELF2O95319 508 aaKnown RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 SULT1A3P0DMM9 295 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 SULT1A4P0DMN0 295 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 ATP1B2P14415 290 aaPredicted RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 ZP3P21754 424 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 MMP11P24347 488 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 CSKP41240 450 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 SLC1A3P43003 542 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 MTNR1AP48039 350 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 SMSP52788 366 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 MC1RQ01726 317 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 CAMK2DQ13557 499 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 NAE1Q13564 534 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 HECTD3Q5T447 861 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 C1orf94Q6P1W5 598 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 MED27Q6P2C8 311 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 RSPO2Q6UXX9 243 aaPredicted RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 SLCO4C1Q6ZQN7 724 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 RTL4Q6ZR62 310 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 PLEKHM3Q6ZWE6 761 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 IKBIPQ70UQ0 350 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 ADGRD2Q7Z7M1 963 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 LUZP2Q86TE4 346 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 CDH24Q86UP0 819 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 RAET1EQ8TD07 263 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 HSD17B8Q92506 261 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 RBPMSQ93062 196 aaKnown RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 KCTD12Q96CX2 325 aaKnown RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 TMEM19Q96HH6 336 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 JAM3Q9BX67 310 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 KLF16Q9BXK1 252 aaPredicted RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 HDHD2Q9H0R4 259 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 ABCG5Q9H222 651 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 MVB12BQ9H7P6 319 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 BRD9Q9H8M2 597 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 KCMF1Q9P0J7 381 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 TBL1XO60907 577 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 SH3BGRLO75368 114 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 MTRF1O75570 445 aaKnown RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 DDNO94850 711 aaPredicted RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 LATS1O95835 1130 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 BCHEP06276 602 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 ATF4P18848 351 aaPredicted RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 AHCYP23526 432 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 WEE1P30291 646 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 SOAT1P35610 550 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 THPOP40225 353 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 MTNR1BP49286 362 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 SHC2P98077 582 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 CSTF1Q05048 431 aaKnown RBP9.13□□□□□ -0.95
HOXA1-201ENST00000343060 UBE3AQ05086 875 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 PUDPQ08623 228 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 RPA4Q13156 261 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 ZDHHC20Q5W0Z9 365 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 HBMQ6B0K9 141 aa9.13□□□□□ -0.95
HOXA1-201ENST00000343060 RAET1GQ6H3X3 334 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms