RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 RELL1Q8IUW5 271 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 FBXL8Q96CD0 374 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 ECHDC3Q96DC8 303 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 CWH43Q9H720 699 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 C17orf105B2RV13 164 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 EPHA4P54764 986 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 KLHDC10Q6PID8 442 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 RTL10Q7L3V2 364 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 VASH1Q7L8A9 365 aaPredicted RBP14.27□□□□□ -0.12
UBE3B-202ENST00000342494 ZNF551Q7Z340 670 aaPredicted RBP14.27□□□□□ -0.12
UBE3B-202ENST00000342494 FCAMRQ8WWV6 532 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 ZNF778Q96MU6 729 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 TOX2Q96NM4 488 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 MTHFD2LQ9H903 347 aaPredicted RBP14.27□□□□□ -0.12
UBE3B-202ENST00000342494 FBXL3Q9UKT7 428 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 RPH3AQ9Y2J0 694 aaPredicted RBP14.27□□□□□ -0.12
UBE3B-202ENST00000342494 GSTT2P0CG29 244 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 GJA5P36382 358 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 TRAPPC6BQ86SZ2 158 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 OR2T4Q8NH00 348 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 KLHL21Q9UJP4 597 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 HCFC2Q9Y5Z7 792 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 SPEF2Q9C093 1822 aa14.27□□□□□ -0.12
UBE3B-202ENST00000342494 MT-ND2P03891 347 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 PRSS56P0CW18 603 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 SOX9P48436 509 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 PGGT1BP53609 377 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 TMPRSS12Q86WS5 348 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 TP53INP2Q8IXH6 220 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 KCNIP1Q9NZI2 227 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 RNF215Q9Y6U7 377 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 SHPRHQ149N8 1683 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 ANKRD26Q9UPS8 1709 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 A0A0G2JPF8 293 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 HNRNPCL3B7ZW38 293 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 HNRNPCL4P0DMR1 293 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 CD38P28907 300 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 KIR2DS3Q14952 304 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 GRHL2Q6ISB3 625 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 TRIM43Q96BQ3 446 aaPredicted RBP14.27□□□□□ -0.13
UBE3B-202ENST00000342494 CNN2Q99439 309 aaKnown RBP14.27□□□□□ -0.13
UBE3B-202ENST00000342494 RBM24Q9BX46 236 aaKnown RBP14.27□□□□□ -0.13
UBE3B-202ENST00000342494 EHD1Q9H4M9 534 aa14.27□□□□□ -0.13
UBE3B-202ENST00000342494 A0A1W2PPK0 400 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 CD63P08962 238 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 CERS1P27544 350 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 ACTA2P62736 377 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 ACTG2P63267 376 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 HNRNPA0Q13151 305 aaKnown RBP14.26□□□□□ -0.13
UBE3B-202ENST00000342494 MFSD13AQ14CX5 517 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 CTC1Q2NKJ3 1217 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 DPPA4Q7L190 304 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 CEACAM19Q7Z692 300 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 SAMD12Q8N8I0 201 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 OR52E2Q8NGJ4 325 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 NEIL3Q8TAT5 605 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 LRRC15Q8TF66 581 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 TMEM19Q96HH6 336 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 SLC46A2Q9BY10 475 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 ZNF350Q9GZX5 532 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 TMEM185BQ9H7F4 350 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 IL26Q9NPH9 171 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 MTMR10Q9NXD2 777 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 GJD2Q9UKL4 321 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 ZNF451Q9Y4E5 1061 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 A0A0A6YYC8 382 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-202ENST00000342494 I3L1I5 382 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-202ENST00000342494 ZNF888P0CJ79 500 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-202ENST00000342494 HTR1EP28566 365 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 SLC26A5P58743 744 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 CDKN3Q16667 212 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 C18orf21Q32NC0 220 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-202ENST00000342494 ZNF829Q3KNS6 432 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-202ENST00000342494 MFSD8Q8NHS3 518 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 KLF16Q9BXK1 252 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-202ENST00000342494 HAPLN2Q9GZV7 340 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 KCMF1Q9P0J7 381 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 SH3BGRL2Q9UJC5 107 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 TRBV2A0A0J9YWF9 115 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 RDH16O75452 317 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 EEDO75530 441 aaKnown RBP14.26□□□□□ -0.13
UBE3B-202ENST00000342494 CLCN2P51788 898 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 TLE3Q04726 772 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 NADK2Q4G0N4 442 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 LEG1Q6P5S2 330 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 SHISA6Q6ZSJ9 500 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 HTR3DQ70Z44 454 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 LHFPL3Q86UP9 236 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 TEX26Q8N6G2 289 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 OR8J1Q8NGP2 316 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 TCEAL4Q96EI5 215 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 PGAP3Q96FM1 320 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-202ENST00000342494 SLC25A44Q96H78 314 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-202ENST00000342494 RDH12Q96NR8 316 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 SLC30A2Q9BRI3 323 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 MKS1Q9NXB0 559 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 ZNF226Q9NYT6 803 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 ZNF175Q9Y473 711 aa14.26□□□□□ -0.13
UBE3B-202ENST00000342494 SMAD6O43541 496 aaKnown RBP14.26□□□□□ -0.13
UBE3B-202ENST00000342494 ACTL6BO94805 426 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms