RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 MRPL43Q8N983 215 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 OR8D4Q8NGM9 314 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 OR8J1Q8NGP2 316 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 OR8K5Q8NH50 307 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CXorf40AQ8TE69 158 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 GATAD2BQ8WXI9 593 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 TM9SF4Q92544 642 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 LINC00615Q96LM1 132 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 AMDHD1Q96NU7 426 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 AGAP4Q96P64 663 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 DCLRE1CQ96SD1 692 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 NELL2Q99435 816 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 MENTQ9BUN1 341 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 TRMT61BQ9BVS5 477 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 FNDC11Q9BVV2 318 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 BEX2Q9BXY8 128 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 RHBGQ9H310 441 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 DPEP2Q9H4A9 486 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 OSGEPL1Q9H4B0 414 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 SYNPO2LQ9H987 977 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 DYRK4Q9NR20 520 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 MBNL1Q9NR56 388 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 DDX28Q9NUL7 540 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 TXNL4BQ9NX01 149 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 NDUFB11Q9NX14 153 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 AHSPQ9NZD4 102 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CNIH4Q9P003 139 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CRNNQ9UBG3 495 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 P2RX2Q9UBL9 471 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 SEC14L4Q9UDX3 406 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 IL20RAQ9UHF4 553 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 ENOPH1Q9UHY7 261 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 HCN2Q9UL51 889 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 RPL36Q9Y3U8 105 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CMAHPQ9Y471 501 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 DNMT3AQ9Y6K1 912 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CHD9Q3L8U1 2897 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 IGLON5A6NGN9 336 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CPSF4LA6NMK7 179 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 VEGFDO43915 354 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 NCR1O76036 304 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 PDE9AO76083 593 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 SEMA3DO95025 777 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 RAB36O95755 333 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 ACP5P13686 325 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 DDX6P26196 483 aaKnown RBP eCLIP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 SDC2P34741 201 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CTNNB1P35222 781 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 TIE1P35590 1138 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 HTR3AP46098 478 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 GAS1P54826 345 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 RACK1P63244 317 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CSNK1G2P78368 415 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 SLAMF1Q13291 335 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 GPR50Q13585 617 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 NCF4Q15080 339 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 SNAPC1Q16533 368 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 HNRNPA1L2Q32P51 320 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 GPAT3Q53EU6 434 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CCDC92Q53HC0 331 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 MEDAGQ5VYS4 303 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 TMEM107Q6UX40 140 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 ZNF517Q6ZMY9 492 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 PRICKLE2Q7Z3G6 844 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 VRK2Q86Y07 508 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CCDC116Q8IYX3 515 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CAMKK1Q8N5S9 505 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 TBC1D19Q8N5T2 526 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 ZNF557Q8N988 423 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 MORN4Q8NDC4 146 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 OR6F1Q8NGZ6 308 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 OR5K2Q8NHB8 316 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 DOK4Q8TEW6 326 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 SLC9A6Q92581 669 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 RGMAQ96B86 450 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 ZG16BQ96DA0 208 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 RNFT2Q96EX2 444 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 ZBED6CLQ96FA7 236 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 FAM46AQ96IP4 442 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 TOX2Q96NM4 488 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 FERD3LQ96RJ6 166 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 ZNF607Q96SK3 696 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CCDC32Q9BV29 185 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 YIPF2Q9BWQ6 316 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 SRRQ9GZT4 340 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 NEUROD4Q9HD90 331 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 WASH6PQ9NQA3 447 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 IMP3Q9NV31 184 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 CXXC1Q9P0U4 656 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 SSR3Q9UNL2 185 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 KCNK6Q9Y257 313 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 MRPS23Q9Y3D9 190 aaKnown RBP6.86□□□□□ -1.31
PTPRR-202ENST00000342084 N6AMT1Q9Y5N5 214 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 IRAK3Q9Y616 596 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 REV3LO60673 3130 aa6.86□□□□□ -1.31
PTPRR-202ENST00000342084 MN1Q10571 1320 aaPredicted RBP6.85□□□□□ -1.31
PTPRR-202ENST00000342084 C17orf113A0A1B0GUU1 675 aa6.85□□□□□ -1.31
PTPRR-202ENST00000342084 A0A1W2PQL4 384 aaPredicted RBP6.85□□□□□ -1.31
PTPRR-202ENST00000342084 DVL2O14641 736 aa6.85□□□□□ -1.31
PTPRR-202ENST00000342084 NARSO43776 548 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms