RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 EVI2BP34910 448 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 GSTM5P46439 218 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 PRKAG1P54619 331 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 MANFP55145 182 aaKnown RBP11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 PDE7AQ13946 482 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 ZNF750Q32MQ0 723 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 SLC35F1Q5T1Q4 408 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 CNIH2Q6PI25 160 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 VWA5B2Q8N398 1253 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 XAGE5Q8WWM1 108 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 OMA1Q96E52 524 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 NPAP1Q9NZP6 1156 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 CNIH4Q9P003 139 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 LSM7Q9UK45 103 aaKnown RBP11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 POLHQ9Y253 713 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 HCFC2Q9Y5Z7 792 aa11.31□□□□□ -0.6
CCDC144CP-201ENST00000340196 KIAA1671Q9BY89 1806 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 LEFTY2O00292 366 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 HMGN4O00479 90 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 PTGS2P35354 604 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 OR3A3P47888 321 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 RNF144AP50876 292 aaPredicted RBP11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 CTBP2P56545 445 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 TAP2Q03519 686 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 HENMT1Q5T8I9 393 aaKnown RBP11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 C12orf73Q69YU5 71 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 TMC8Q8IU68 726 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 RASGRP3Q8IV61 690 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 SLC39A11Q8N1S5 342 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 GALNT6Q8NCL4 622 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 ZFPM2Q8WW38 1151 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 SENP5Q96HI0 755 aaPredicted RBP11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 NLNQ9BYT8 704 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 MRPL17Q9NRX2 175 aaKnown RBP11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 CUEDC1Q9NWM3 386 aaPredicted RBP11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 MCUBQ9NWR8 336 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 TEX10Q9NXF1 929 aaPredicted RBP11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 NTNG1Q9Y2I2 539 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 RWDD3Q9Y3V2 267 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 CD8B2A6NJW9 211 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 GTPBP1O00178 669 aaKnown RBP11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 PLPP1O14494 284 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 SLC28A2O43868 658 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 ATG13O75143 517 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 ADAP00813 363 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 SOD2P04179 222 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 CD8BP10966 210 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 CSF2RAP15509 400 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 CCR2P41597 374 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 ILKQ13418 452 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 SNAPC1Q16533 368 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 BTBD16Q32M84 506 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 ZNF791Q3KP31 576 aaPredicted RBP11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 IDO2Q6ZQW0 420 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 KIF18BQ86Y91 864 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 Q8N402 240 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 VN1R2Q8NFZ6 395 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 OR4F15Q8NGB8 312 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 SETD6Q8TBK2 473 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 RASSF5Q8WWW0 418 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 AP2M1Q96CW1 435 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 TRMT2BQ96GJ1 504 aaKnown RBP11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 ZNF582Q96NG8 517 aaPredicted RBP11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 AIFM2Q9BRQ8 373 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 SLC46A2Q9BY10 475 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 KLHL42Q9P2K6 505 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 SEC14L3Q9UDX4 400 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 HS3ST2Q9Y278 367 aa11.3□□□□□ -0.6
CCDC144CP-201ENST00000340196 PTPRSQ13332 1948 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 IQCMA0A1B0GVH7 501 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 C12orf71A8MTZ7 269 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 HYAL3O43820 417 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 SCO1O75880 301 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 POP4O95707 220 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 EPPINO95925 133 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 SERPIND1P05546 499 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 YES1P07947 543 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 C1GALT1C1LP0DN25 315 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 EPHB3P54753 998 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 WDR5P61964 334 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 DEFB103AP81534 67 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 MESP2Q0VG99 397 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 MLLT11Q13015 90 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 ASAH1Q13510 395 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 IL18Q14116 193 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 C6orf120Q7Z4R8 191 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 CACUL1Q86Y37 369 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 RDH10Q8IZV5 341 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 GHDCQ8N2G8 530 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 OR4K5Q8NGD3 323 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 OR6T1Q8NGN1 323 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 BTN2A2Q8WVV5 523 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 GLYATL1Q969I3 302 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 TREX2Q9BQ50 279 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 ATP13A2Q9NQ11 1180 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 COQ3Q9NZJ6 369 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 TRPC4Q9UBN4 977 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 FBXW2Q9UKT8 454 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 HCN2Q9UL51 889 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 A4GNTQ9UNA3 340 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms