RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ARL13AQ5H913 290 aaPredicted RBP13.45□□□□□ -0.26
ERCC1-203ENST00000340192 KANK2Q63ZY3 851 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 NOXRED1Q6NXP6 359 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 RGS9BPQ6ZS82 235 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 ZCCHC23Q6ZST2 131 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 SLC22A16Q86VW1 577 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 SAMD14Q8IZD0 417 aaPredicted RBP13.45□□□□□ -0.26
ERCC1-203ENST00000340192 FBXW8Q8N3Y1 598 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 OR52R1Q8NGF1 315 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.45□□□□□ -0.263e-8■■■■■ 42.4
ERCC1-203ENST00000340192 ZNF675Q8TD23 568 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 TUBB1Q9H4B7 451 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 ZDHHC11Q9H8X9 412 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 IL1RL2Q9HB29 575 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 EML4Q9HC35 981 aaKnown RBP13.45□□□□□ -0.26
ERCC1-203ENST00000340192 MYNNQ9NPC7 610 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 SLC35C2Q9NQQ7 365 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 PLSCR2Q9NRY7 297 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 GIMAP4Q9NUV9 329 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 TUBA8Q9NY65 449 aaPredicted RBP13.45□□□□□ -0.26
ERCC1-203ENST00000340192 EHD3Q9NZN3 535 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 CNIH4Q9P003 139 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 SENP1Q9P0U3 644 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 SUCOQ9UBS9 1254 aaKnown RBP13.45□□□□□ -0.26
ERCC1-203ENST00000340192 ENTPD4Q9Y227 616 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 CFL2Q9Y281 166 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 DNAJC15Q9Y5T4 150 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 NPFFR2Q9Y5X5 522 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.45□□□□□ -0.26
ERCC1-203ENST00000340192 CAPN14A8MX76 684 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 RGS16O15492 202 aaPredicted RBP13.44□□□□□ -0.26
ERCC1-203ENST00000340192 RGS14O43566 566 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 CHEK2O96017 543 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 TUBBP07437 444 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 LINC00032P0C843 101 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 ESRRAP11474 423 aaPredicted RBP13.44□□□□□ -0.26
ERCC1-203ENST00000340192 PRPH2P23942 346 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 MPIP34949 423 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 MAGEA5P43359 124 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 TMED10P49755 219 aaKnown RBP13.44□□□□□ -0.26
ERCC1-203ENST00000340192 FBXW4P57775 412 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 KCNJ2P63252 427 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 KIAA0040Q15053 153 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 RPS6KA2Q15349 733 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 CEBPEQ15744 281 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 NNATQ16517 81 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 PRSS53Q2L4Q9 553 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 FAM71E1Q6IPT2 247 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 MTFR2Q6P444 385 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 RNF165Q6ZSG1 346 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 DOLPP1Q86YN1 238 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 PRR22Q8IZ63 422 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 TMEM251Q8N6I4 163 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 OR9A2Q8NGT5 310 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 OR2T11Q8NH01 316 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 KAT2AQ92830 837 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 ZBTB9Q96C00 473 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 METTL2AQ96IZ6 378 aaKnown RBP13.44□□□□□ -0.26
ERCC1-203ENST00000340192 ITPAQ9BY32 194 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 NXF5Q9H1B4 397 aaKnown RBP13.44□□□□□ -0.26
ERCC1-203ENST00000340192 ANKRA2Q9H9E1 313 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 LRTM1Q9HBL6 345 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 PROK2Q9HC23 129 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 MIEF1Q9NQG6 463 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 C1orf109Q9NX04 203 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 CNOT11Q9UKZ1 510 aaKnown RBP13.44□□□□□ -0.26
ERCC1-203ENST00000340192 CELSR2Q9HCU4 2923 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 NINQ8N4C6 2090 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 ZNF407Q9C0G0 2248 aa13.44□□□□□ -0.26
ERCC1-203ENST00000340192 NPIPB8E9PQR5 432 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 PRRG2O14669 202 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 TP53I11O14683 189 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 BPGMP07738 259 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 FGF4P08620 206 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 NEFHP12036 1026 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 TACR1P25103 407 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 COL8A1P27658 744 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 ABCD3P28288 659 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 ARRB2P32121 409 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 PTGS2P35354 604 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 ETV4P43268 484 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 EMDP50402 254 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 HYAL4Q2M3T9 481 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 UGT3A2Q3SY77 523 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 SH2D4BQ5SQS7 431 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 ARHGAP11AQ6P4F7 1023 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 PAOXQ6QHF9 649 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 C3P1Q6ZMU1 363 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 Q6ZSR9 355 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 IKBIPQ70UQ0 350 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 TICAM1Q8IUC6 712 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 FAM109AQ8N4B1 249 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 FAM57AQ8TBR7 257 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 AGR3Q8TD06 166 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 ITLN2Q8WWU7 325 aaPredicted RBP13.43□□□□□ -0.26
ERCC1-203ENST00000340192 DIO2Q92813 273 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 ERP27Q96DN0 273 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 LCORQ96JN0 433 aaPredicted RBP13.43□□□□□ -0.26
ERCC1-203ENST00000340192 ZIM3Q96PE6 472 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms