RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 HSD17B1P14061 328 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 PVALBP20472 110 aaPredicted RBP8.29□□□□□ -1.08
RTN3-202ENST00000339997 LSSP48449 732 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 CRYZQ08257 329 aaKnown RBP8.29□□□□□ -1.08
RTN3-202ENST00000339997 SEC23BQ15437 767 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 CATSPEREQ5SY80 951 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 ATAD3CQ5T2N8 411 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 NDUFAF5Q5TEU4 345 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 OR2G6Q5TZ20 316 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 TCEAL6Q6IPX3 200 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 LCN10Q6JVE6 187 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 LRRC69Q6ZNQ3 347 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 TSPYL5Q86VY4 417 aaPredicted RBP8.29□□□□□ -1.08
RTN3-202ENST00000339997 NRMQ8IXM6 262 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 B3GNT7Q8NFL0 401 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 OR5D16Q8NGK9 328 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 ZNF597Q96LX8 424 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 OR4K3Q96R72 315 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 SYT4Q9H2B2 425 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 C10orf71Q711Q0 1435 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 A0A0A6YYH2 397 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 MTMR11A4FU01 709 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 A6NJ64 397 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 TMX2-CTNND1H3BSU7 103 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 J3KTA2 159 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 PROS1P07225 676 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 ASGR2P07307 311 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 GABRA3P34903 492 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 SLC11A1P49279 550 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 ZNF367Q7RTV3 350 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 NOXA1Q86UR1 476 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 ZNF761Q86XN6 746 aaPredicted RBP8.29□□□□□ -1.08
RTN3-202ENST00000339997 OR2T33Q8NG76 320 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 SLC25A18Q9H1K4 315 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 RNF121Q9H920 327 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 CLEC4EQ9ULY5 219 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 PCDHB11Q9Y5F2 797 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 BCL9LQ86UU0 1499 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 IFNA21P01568 189 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 ERP29P30040 261 aaKnown RBP8.29□□□□□ -1.08
RTN3-202ENST00000339997 INHBCP55103 352 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 C1orf61Q13536 156 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 BCDIN3DQ7Z5W3 292 aaKnown RBP8.29□□□□□ -1.08
RTN3-202ENST00000339997 CPOQ8IVL8 374 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 LINC00471Q8N535 108 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 ACBD7Q8N6N7 88 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 ZDHHC1Q8WTX9 485 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 SMPDL3AQ92484 453 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 PSKH2Q96QS6 385 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 MRTO4Q9UKD2 239 aaKnown RBP8.29□□□□□ -1.08
RTN3-202ENST00000339997 NPIPA5A0A0B4J1W7 369 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 NPIPA7E9PJI5 369 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 FUCA1P04066 466 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 NPIPA8P0DM63 369 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 ZNF35P13682 527 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 CCKBRP32239 447 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 TNFSF8P32971 234 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 CPOXP36551 454 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 TBPL1P62380 186 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 LRIT3Q3SXY7 679 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 EIPR1Q53HC9 387 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 NADSYN1Q6IA69 706 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 ARSKQ6UWY0 536 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 LRRTM4Q86VH4 590 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 LRRTM3Q86VH5 581 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 PARP16Q8N5Y8 322 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 OR52E2Q8NGJ4 325 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 SLC22A17Q8WUG5 538 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 IL12RB2Q99665 862 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 SPATA9Q9BWV2 254 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 NMNAT1Q9HAN9 279 aaPredicted RBP8.29□□□□□ -1.08
RTN3-202ENST00000339997 TMEM248Q9NWD8 314 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 TEX10Q9NXF1 929 aaPredicted RBP8.29□□□□□ -1.08
RTN3-202ENST00000339997 PCDHGB5Q9Y5G0 923 aa8.29□□□□□ -1.08
RTN3-202ENST00000339997 MYH3P11055 1940 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 BAZ2AQ9UIF9 1905 aaKnown RBP8.28□□□□□ -1.08
RTN3-202ENST00000339997 FAM227AF5H4B4 570 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 HSPA12AO43301 675 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 KDELR3O43731 214 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 NFATC1O95644 943 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 RAB3BP20337 219 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 GPX3P22352 226 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 CHMP24386 653 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 TP53I3Q53FA7 332 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 METTL2BQ6P1Q9 378 aaKnown RBP8.28□□□□□ -1.08
RTN3-202ENST00000339997 C22orf39Q6P5X5 142 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 RANBP10Q6VN20 620 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 PRSS48Q7RTY5 328 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 SLC30A8Q8IWU4 369 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 APCDD1Q8J025 514 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 CHDHQ8NE62 594 aaPredicted RBP8.28□□□□□ -1.08
RTN3-202ENST00000339997 OR9A1PQ8NGU1 263 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 NPRL2Q8WTW4 380 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ASB15Q8WXK1 588 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 TSGA13Q96PP4 275 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 POLDIP3Q9BY77 421 aaKnown RBP8.28□□□□□ -1.08
RTN3-202ENST00000339997 AGPAT4Q9NRZ5 378 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 USP36Q9P275 1121 aaKnown RBP8.28□□□□□ -1.08
RTN3-202ENST00000339997 GRHPRQ9UBQ7 328 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms