RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 PPT2Q9UMR5 302 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 NCKAP1Q9Y2A7 1128 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 GOLGA4Q13439 2230 aaKnown RBP11.97□□□□□ -0.49
DFFB-202ENST00000339350 TEX13CA0A0J9YWL9 993 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 CPSF4O95639 269 aaKnown RBP11.97□□□□□ -0.49
DFFB-202ENST00000339350 ESR1P03372 595 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 STSP08842 583 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 SPP1P10451 314 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 NDUFB7P17568 137 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 CXCL3P19876 107 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 POU3F2P20265 443 aaPredicted RBP11.97□□□□□ -0.49
DFFB-202ENST00000339350 APEX1P27695 318 aaKnown RBP11.97□□□□□ -0.49
DFFB-202ENST00000339350 S100A3P33764 101 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 PTGER3P43115 390 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 DGKEP52429 567 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 KIAA1024LP59773 190 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 ARF5P84085 180 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 PPA1Q15181 289 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 KLHL22Q53GT1 634 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 LRRC66Q68CR7 880 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 FUT10Q6P4F1 479 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 GLB1LQ6UWU2 654 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 USP53Q70EK8 1073 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 DPPA2Q7Z7J5 298 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 C12orf45Q8N5I9 185 aaPredicted RBP11.97□□□□□ -0.49
DFFB-202ENST00000339350 DUSP18Q8NEJ0 188 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 WDR20Q8TBZ3 569 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 APH1BQ8WW43 257 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 NXPE2Q96DL1 559 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 APOLD1Q96LR9 279 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 FAM193BQ96PV7 902 aaPredicted RBP11.97□□□□□ -0.49
DFFB-202ENST00000339350 ZNF436Q9C0F3 470 aaPredicted RBP11.97□□□□□ -0.49
DFFB-202ENST00000339350 P2RY12Q9H244 342 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 SERHLQ9NQF3 203 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 ZMIZ1Q9ULJ6 1067 aa11.97□□□□□ -0.49
DFFB-202ENST00000339350 VCANP13611 3396 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 MANBAO00462 879 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 CDC123O75794 336 aaPredicted RBP11.96□□□□□ -0.49
DFFB-202ENST00000339350 LALBAP00709 142 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 FAM157BP0CG42 384 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 PRKAR1AP10644 381 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 CKBP12277 381 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 TNFRSF1BP20333 461 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 MAPK1P28482 360 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 SPCS3P61009 180 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 RPS14P62263 151 aaKnown RBP11.96□□□□□ -0.49
DFFB-202ENST00000339350 KCNJ10P78508 379 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 NHLRC3Q5JS37 347 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 BCL2L15Q5TBC7 163 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 TRMT11Q7Z4G4 463 aaKnown RBP11.96□□□□□ -0.49
DFFB-202ENST00000339350 LUZP2Q86TE4 346 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 BTN2A2Q8WVV5 523 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 SELENOMQ8WWX9 145 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 KCNC2Q96PR1 638 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 OR5M11Q96RB7 305 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 PFDN5Q99471 154 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 MAGEH1Q9H213 219 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 MIXL1Q9H2W2 232 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 SEC14L4Q9UDX3 406 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 Q9Y3F1 56 aa11.96□□□□□ -0.49
DFFB-202ENST00000339350 SAMHD1Q9Y3Z3 626 aaKnown RBP11.96□□□□□ -0.49
DFFB-202ENST00000339350 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.96□□□□□ -0.5
DFFB-202ENST00000339350 SMIM30A4D0T7 59 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 MPTX1A8MV57 137 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 SEC14L5O43304 696 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 HCN1O60741 890 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 ANXA3P12429 323 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 NR2C1P13056 603 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 ACLYP53396 1101 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 PRMT2P55345 433 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 DCDC1P59894 354 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 ZNF177Q13360 481 aaPredicted RBP11.96□□□□□ -0.5
DFFB-202ENST00000339350 EXOC3L2Q2M3D2 409 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 CLEC2AQ6UVW9 174 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 PRSS55Q6UWB4 352 aaPredicted RBP11.96□□□□□ -0.5
DFFB-202ENST00000339350 ZNF621Q6ZSS3 439 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 KRT78Q8N1N4 520 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 NR4A3Q92570 626 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 APIPQ96GX9 242 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 SLC38A3Q99624 504 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 CPPED1Q9BRF8 314 aaPredicted RBP11.96□□□□□ -0.5
DFFB-202ENST00000339350 ADGRE3Q9BY15 652 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 NKX6-2Q9C056 277 aaPredicted RBP11.96□□□□□ -0.5
DFFB-202ENST00000339350 SEMA4CQ9C0C4 833 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 EVA1AQ9H8M9 152 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 SLCO1C1Q9NYB5 712 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 REV3LO60673 3130 aa11.96□□□□□ -0.5
DFFB-202ENST00000339350 A0A1W2PQL4 384 aaPredicted RBP11.95□□□□□ -0.5
DFFB-202ENST00000339350 H3BNC9 293 aa11.95□□□□□ -0.5
DFFB-202ENST00000339350 IFRD1O00458 451 aaPredicted RBP11.95□□□□□ -0.5
DFFB-202ENST00000339350 RFXANKO14593 260 aa11.95□□□□□ -0.5
DFFB-202ENST00000339350 KDELR3O43731 214 aa11.95□□□□□ -0.5
DFFB-202ENST00000339350 RASGRP1O95267 797 aa11.95□□□□□ -0.5
DFFB-202ENST00000339350 CLDN7O95471 211 aa11.95□□□□□ -0.5
DFFB-202ENST00000339350 IGLV3-27P01718 113 aa11.95□□□□□ -0.5
DFFB-202ENST00000339350 F11P03951 625 aa11.95□□□□□ -0.5
DFFB-202ENST00000339350 NMBP08949 121 aa11.95□□□□□ -0.5
DFFB-202ENST00000339350 FGF2P09038 288 aa11.95□□□□□ -0.5
DFFB-202ENST00000339350 SLC2A2P11168 524 aaPredicted RBP11.95□□□□□ -0.5
DFFB-202ENST00000339350 RHCEP18577 417 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms