RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 MIPOL1Q8TD10 442 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 SLC9A6Q92581 669 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 ZG16BQ96DA0 208 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 FFAR1O14842 300 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 PCDH17O14917 1159 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 FOXS1O43638 330 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 SRPX2O60687 465 aaPredicted RBP21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 DNAJB5O75953 348 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 GPR75O95800 540 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 IL7RP16871 459 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 RPL5P46777 297 aaKnown RBP21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 ANXA11P50995 505 aaKnown RBP21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 ZXDAP98168 799 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 NADK2Q4G0N4 442 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 SNAP47Q5SQN1 464 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 THAP5Q7Z6K1 395 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 LGI4Q8N135 537 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 SLC35A4Q96G79 324 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 FEVQ99581 238 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 ACTRT3Q9BYD9 372 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 ACER3Q9NUN7 267 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 WDFY4Q6ZS81 3184 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 OR2W5A6NFC9 320 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 TLCD2A6NGC4 264 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 NT5EP21589 574 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 CTSKP43235 329 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 GABRA4P48169 554 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 KCNC4Q03721 635 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 ERV3-1Q14264 604 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 SHBQ15464 509 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 MEP1AQ16819 746 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 RFX4Q33E94 735 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 MFSD12Q6NUT3 480 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 FAHD1Q6P587 224 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 DEF8Q6ZN54 512 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 SLC5A8Q8N695 610 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 OR4C15Q8NGM1 316 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 GIPC3Q8TF64 312 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 ZNF354BQ96LW1 612 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 NECAB3Q96P71 396 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 ADAP2Q9NPF8 381 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 TMEM9Q9P0T7 183 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 M0R3H8 397 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 RAB38P57729 211 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 CHRNEQ04844 493 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 RAPSNQ13702 412 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 ZNF628Q5EBL2 1059 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 KRT73Q86Y46 540 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 GATAD2AQ86YP4 633 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 OR2L13Q8N349 312 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 OR10G2Q8NGC3 310 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 OR9Q2Q8NGE9 314 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 ADAMTS15Q8TE58 950 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 ANKRD9Q96BM1 317 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 PEX11GQ96HA9 241 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 ELF4Q99607 663 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 SPRTNQ9H040 489 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 PDE7BQ9NP56 450 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 AASSQ9UDR5 926 aa21.01■□□□□ 0.95
PDLIM2-203ENST00000339162 BCKDKO14874 412 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 FCMRO60667 390 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 JRKO75564 520 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 GADD45GO95257 159 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 ZBTB11O95625 1053 aaPredicted RBP21■□□□□ 0.95
PDLIM2-203ENST00000339162 RHCEP18577 417 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 CLK3P49761 638 aaKnown RBP21■□□□□ 0.95
PDLIM2-203ENST00000339162 CFHR1Q03591 330 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 CTU2Q2VPK5 515 aaKnown RBP21■□□□□ 0.95
PDLIM2-203ENST00000339162 KCTD21Q4G0X4 260 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 DGAT2L6Q6ZPD8 337 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 C16orf62Q7Z3J2 963 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 ZNF605Q86T29 641 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 CDS1Q92903 461 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 ZDHHC12Q96GR4 267 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 MS4A4EQ96PG1 132 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 PLCL2Q9UPR0 1127 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 ARID1BQ8NFD5 2236 aaPredicted RBP21■□□□□ 0.95
PDLIM2-203ENST00000339162 IGHV1OR21-1A0A087WYE8 117 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 HYKKA2RU49 373 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 CT62P0C5K7 136 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 EXOSC7Q15024 291 aaKnown RBP21■□□□□ 0.95
PDLIM2-203ENST00000339162 TCTN3Q6NUS6 607 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 APLFQ8IW19 511 aaPredicted RBP21■□□□□ 0.95
PDLIM2-203ENST00000339162 BBS10Q8TAM1 723 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 TANKQ92844 425 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 NPLQ9BXD5 320 aaPredicted RBP21■□□□□ 0.95
PDLIM2-203ENST00000339162 SLC38A1Q9H2H9 487 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 ADNPQ9H2P0 1102 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 BCL2L10Q9HD36 194 aa21■□□□□ 0.95
PDLIM2-203ENST00000339162 WDR87Q6ZQQ6 2873 aa20.99■□□□□ 0.95
PDLIM2-203ENST00000339162 SLC16A6O15403 523 aa20.99■□□□□ 0.95
PDLIM2-203ENST00000339162 EPPINO95925 133 aa20.99■□□□□ 0.95
PDLIM2-203ENST00000339162 ATP1B1P05026 303 aa20.99■□□□□ 0.95
PDLIM2-203ENST00000339162 POU2F1P14859 743 aa20.99■□□□□ 0.95
PDLIM2-203ENST00000339162 CD47Q08722 323 aa20.99■□□□□ 0.95
PDLIM2-203ENST00000339162 MICAQ29983 383 aa20.99■□□□□ 0.95
PDLIM2-203ENST00000339162 PHF10Q8WUB8 498 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-203ENST00000339162 NIPSNAP1Q9BPW8 284 aa20.99■□□□□ 0.95
PDLIM2-203ENST00000339162 CACNA1EQ15878 2313 aa20.99■□□□□ 0.95
PDLIM2-203ENST00000339162 ZDBF2Q9HCK1 2354 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms