RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TSLPQ969D9 159 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PMEPA1Q969W9 287 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 RNF145Q96MT1 663 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 OR7D2Q96RA2 312 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 EFHD1Q9BUP0 239 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ACTRT3Q9BYD9 372 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 STRADBQ9C0K7 418 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 A4GALTQ9NPC4 353 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ARMC1Q9NVT9 282 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 SLC39A1Q9NY26 324 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 STOML1Q9UBI4 398 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ANGPT4Q9Y264 503 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PRAMEF27A3QJZ7 478 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 C5orf58C9J3I9 102 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 CPNE3O75131 537 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 TIPRLO75663 272 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ZNF682O95780 498 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ZNF28P17035 718 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ITIH1P19827 911 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MAGEA8P43361 318 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 EFNA3P52797 238 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 RHAGQ02094 409 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MYBPC3Q14896 1274 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MAPK11Q15759 364 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 INTS11Q5TA45 600 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ZNF385CQ66K41 422 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MFSD12Q6NUT3 480 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 VWA5B2Q8N398 1253 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 TMEM19Q96HH6 336 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PKP2Q99959 881 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 UGT2B28Q9BY64 529 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 OLAHQ9NV23 265 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 THUMPD1Q9NXG2 353 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 LOXL2Q9Y4K0 774 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PCDHGA1Q9Y5H4 931 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 KCNE3Q9Y6H6 103 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 EP300Q09472 2414 aaPredicted RBP13.77□□□□□ -0.2
CDK5RAP3-201ENST00000338399 TMEM247A6NEH6 219 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HRKO00198 91 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SLC28A2O43868 658 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TPST1O60507 370 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 IFI6P09912 130 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TNNI3P19429 210 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 RORAP35398 523 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PTDSS1P48651 473 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MAN2A2P49641 1150 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CRYBA2P53672 197 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FOXL2P58012 376 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 OCA2Q04671 838 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CHRNB3Q05901 458 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 BIKQ13323 160 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SYPL1Q16563 259 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 NKG7Q16617 165 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ISXQ2M1V0 245 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FAM98BQ52LJ0 330 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 RPS26P11Q5JNZ5 115 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CDCP2Q5VXM1 449 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 REEP3Q6NUK4 255 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DHRS13Q6UX07 377 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SHISA6Q6ZSJ9 500 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SLC30A8Q8IWU4 369 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LGI4Q8N135 537 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 EID3Q8N140 333 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DEFB124Q8NES8 71 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 STT3BQ8TCJ2 826 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ADAMTS15Q8TE58 950 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 NRG4Q8WWG1 115 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LRTOMTQ8WZ04 291 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SLC9A6Q92581 669 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PNO1Q9NRX1 252 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 P2RX2Q9UBL9 471 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MKL2Q9ULH7 1088 aa13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SAMD4AQ9UPU9 718 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-201ENST00000338399 IGKV3D-11A0A0A0MRZ8 115 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 B4E171 279 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MEN1O00255 615 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HNRNPRO43390 633 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FOXD2O60548 495 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CSO75390 466 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CBX7O95931 251 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MT-CO3P00414 261 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MT-ND1P03886 318 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 OPN1SWP03999 348 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZGLP1P0C6A0 271 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 NR2F1P10589 423 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 S1PR1P21453 382 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TSPAN7P41732 249 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PGDP52209 483 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PCBP3P57721 371 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZNF267Q14586 743 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 IRAK1BP1Q5VVH5 260 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LCN10Q6JVE6 187 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CDC73Q6P1J9 531 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LRRC74BQ6ZQY2 392 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CBLL1Q75N03 491 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CCDC80Q76M96 950 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 EIF3MQ7L2H7 374 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ANKFN1Q8N957 763 aa13.76□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SLC16A11Q8NCK7 471 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms