RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 MYOTQ9UBF9 498 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNF223Q9UK11 482 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 ADAM21Q9UKJ8 722 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 C19orf53Q9UNZ5 99 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 YARS2Q9Y2Z4 477 aaKnown RBP11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 CCDC88CQ9P219 2028 aa11.06□□□□□ -0.64
SPTLC1-202ENST00000337841 FREM2Q5SZK8 3169 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 TTC36A6NLP5 189 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 DPM1O60762 260 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 CCDC22O60826 627 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 C6orf47O95873 294 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 CBX7O95931 251 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 ABCB1P08183 1280 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 IL12AP29459 219 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 SOX11P35716 441 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 CASRP41180 1078 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 MC3RP41968 323 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 PPICP45877 212 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 CCT3P49368 545 aaKnown RBP11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 PRKAG1P54619 331 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 WNT3P56703 355 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 PRR5P85299 388 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 LACTB2Q53H82 288 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 PIGGQ5H8A4 983 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 BHLHB9Q6PI77 547 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 IGFL3Q6UXB1 125 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 MSANTD1Q6ZTZ1 278 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 ASB18Q6ZVZ8 466 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 TAGAPQ8N103 731 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 ARMC10Q8N2F6 343 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 OR2L13Q8N349 312 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 TMEM156Q8N614 296 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 CPSF7Q8N684 471 aaKnown RBP11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 SLC15A4Q8N697 577 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 OR7G2Q8NG99 324 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 OR4A15Q8NGL6 344 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 C16orf52Q8NHV5 167 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 HAS2Q92819 552 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 MOAP1Q96BY2 351 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 ITCHQ96J02 903 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 GAL3ST4Q96RP7 486 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 UTP23Q9BRU9 249 aaKnown RBP11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 NEUROD4Q9HD90 331 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 CCDC167Q9P0B6 97 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 BTNL2Q9UIR0 455 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 PTPRQQ9UMZ3 2332 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 SNX8Q9Y5X2 465 aa11.05□□□□□ -0.64
SPTLC1-202ENST00000337841 DMXL2Q8TDJ6 3036 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 CCDC154A6NI56 674 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 CAPN14A8MX76 684 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 WWP2O00308 870 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 UPK1AO00322 258 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 PRKNO60260 465 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 SNX3O60493 162 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 SCN2BO60939 215 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 ITGA10O75578 1167 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 SOX30O94993 753 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 CLPSP04118 112 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 DRD5P21918 477 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 ADSLP30566 484 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 EMDP50402 254 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 CDK9P50750 372 aaKnown RBP11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 SSR4P51571 173 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 NRG3P56975 720 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 PHC1P78364 1004 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 ARG2P78540 354 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 OC90Q02509 493 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 EBPQ15125 230 aaKnown RBP11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNHIT3Q15649 155 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 MAPKAPK3Q16644 382 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 FHL5Q5TD97 284 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 BLOC1S3Q6QNY0 202 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 OPN5Q6U736 354 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 IGFL2Q6UWQ7 119 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 TMEM64Q6YI46 380 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 HORMAD2Q8N7B1 307 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 TRIML2Q8N7C3 387 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 C17orf47Q8NEP4 570 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 NUP43Q8NFH3 380 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 OR56A1Q8NGH5 318 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 PSMA8Q8TAA3 256 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 SLC22A8Q8TCC7 542 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 C10orf82Q8WW14 230 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 CCDC115Q96NT0 180 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 PANX1Q96RD7 426 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 WWTR1Q9GZV5 400 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 RNF32Q9H0A6 362 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 SLC25A18Q9H1K4 315 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 LIN28AQ9H9Z2 209 aaKnown RBP11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNF71Q9NQZ8 489 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 NTMQ9P121 344 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 TP53TG5Q9Y2B4 290 aa11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 HEMK1Q9Y5R4 338 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 MAP1BP46821 2468 aaKnown RBP11.04□□□□□ -0.64
SPTLC1-202ENST00000337841 TMEM200CA6NKL6 621 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 C9JVG2 144 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 ATXN7O15265 892 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 OR2J2O76002 312 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 WDPCPO95876 746 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms