RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 KPNA4O00629 521 aaPredicted RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 TLX2O43763 284 aaPredicted RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 UGT2B17O75795 530 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 ZIC2O95409 532 aaPredicted RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 H1F0P07305 194 aaKnown RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 OCM2P0CE71 109 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 OCMP0CE72 109 aaPredicted RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 ANXA8P13928 327 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 RHCEP18577 417 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 RPL3P39023 403 aaKnown RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 MXD1Q05195 221 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 RBBP4Q09028 425 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 SLC13A2Q13183 592 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 TUBA3CQ13748 450 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 MOGQ16653 247 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 SDE2Q6IQ49 451 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 FAM92BQ6ZTR7 304 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 IKBIPQ70UQ0 350 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 SLC34A3Q8N130 599 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 RAB42Q8N4Z0 105 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 APOBEC4Q8WW27 367 aaKnown RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 BORCS5Q969J3 196 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 ZNF566Q969W8 418 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 ZNF347Q96SE7 839 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 POLR2J3Q9H1A7 115 aaKnown RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 DDX31Q9H8H2 851 aaKnown RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 ABCB10Q9NRK6 738 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 FBXO34Q9NWN3 711 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 TMEM9Q9P0T7 183 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 DAPK2Q9UIK4 370 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 ENTPD4Q9Y227 616 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 SLC17A4Q9Y2C5 497 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 CASC3O15234 703 aaKnown RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 PIP5K1CO60331 668 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 CYP7B1O75881 506 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 CDK1P06493 297 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 ITGA2P17301 1181 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 MMP11P24347 488 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 GTF2E2P29084 291 aaKnown RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 GPR4P46093 362 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 LSSP48449 732 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 GPR18Q14330 331 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 ARHGAP19Q14CB8 494 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 NNATQ16517 81 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 SYT6Q5T7P8 510 aaPredicted RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 MLIPQ5VWP3 458 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 OR2L8Q8NGY9 312 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 ZFPM2Q8WW38 1151 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 CDS1Q92903 461 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 DTNBP1Q96EV8 351 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 FNDC11Q9BVV2 318 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 BTBD2Q9BX70 525 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 ITPAQ9BY32 194 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 NEUROD4Q9HD90 331 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 ADAP2Q9NPF8 381 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 THSD1Q9NS62 852 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 TRNAU1APQ9NX07 287 aaKnown RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 P2RX2Q9UBL9 471 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 FTSJ1Q9UET6 329 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 KLF15Q9UIH9 416 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 A4GNTQ9UNA3 340 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 YARS2Q9Y2Z4 477 aaKnown RBP8.33□□□□□ -1.08
SNCA-201ENST00000336904 PCDHGA4Q9Y5G9 962 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 ASXL3Q9C0F0 2248 aa8.33□□□□□ -1.08
SNCA-201ENST00000336904 LRRC72A6NJI9 287 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 TLR4O00206 839 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 PRKYO43930 277 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 SEMA3DO95025 777 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 IFNA14P01570 189 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 GKN3PP0CG01 181 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 TRHRP34981 398 aaPredicted RBP8.32□□□□□ -1.08
SNCA-201ENST00000336904 KCNJ5P48544 419 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 SERPINB10P48595 397 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 MAN2A2P49641 1150 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 XKP51811 444 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 PDX1P52945 283 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 EXOSC7Q15024 291 aaKnown RBP8.32□□□□□ -1.08
SNCA-201ENST00000336904 GPR68Q15743 365 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 TRMT12Q53H54 448 aaKnown RBP8.32□□□□□ -1.08
SNCA-201ENST00000336904 ZNF770Q6IQ21 691 aaPredicted RBP8.32□□□□□ -1.08
SNCA-201ENST00000336904 ACSM5Q6NUN0 579 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 PGBD2Q6P3X8 592 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 MTSS1LQ765P7 747 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 ZER1Q7Z7L7 766 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 ZNF614Q8N883 585 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 TMEM52Q8NDY8 209 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 NUP43Q8NFH3 380 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 OR13H1Q8NG92 308 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 OR7G2Q8NG99 324 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 OR4K5Q8NGD3 323 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 PIK3R3Q92569 461 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 MTERF3Q96E29 417 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 FAM46AQ96IP4 442 aaKnown RBP8.32□□□□□ -1.08
SNCA-201ENST00000336904 OR7D2Q96RA2 312 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 SPATA9Q9BWV2 254 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 TPSD1Q9BZJ3 242 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 TRPV4Q9HBA0 871 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 POLMQ9NP87 494 aaPredicted RBP8.32□□□□□ -1.08
SNCA-201ENST00000336904 SEC16AO15027 2179 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 CLEC3AO75596 197 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms