RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 PCDHB14Q9Y5E9 798 aa14.08□□□□□ -0.16
CMC1-201ENST00000334841 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 TAF4O00268 1085 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 PEX12O00623 359 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 AIM2O14862 343 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 RRP8O43159 456 aaKnown RBP14.07□□□□□ -0.16
CMC1-201ENST00000334841 EMC8O43402 210 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 ANP32DO95626 131 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 UQCRC2P22695 453 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 CCT3P49368 545 aaKnown RBP14.07□□□□□ -0.16
CMC1-201ENST00000334841 NUDT2P50583 147 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 SLC37A1P57057 533 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 TLE3Q04726 772 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 Q0VFX4 171 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 TP53BP2Q13625 1128 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 CAPRIN1Q14444 709 aaKnown RBP14.07□□□□□ -0.16
CMC1-201ENST00000334841 BTBD16Q32M84 506 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 PLAG1Q6DJT9 500 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 ZNF621Q6ZSS3 439 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 C9orf40Q8IXQ3 194 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 KIF2BQ8N4N8 673 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 OR7G1Q8NGA0 311 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 FBXO27Q8NI29 283 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 GIMAP5Q96F15 307 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 MS4A4EQ96PG1 132 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 PHF12Q96QT6 1004 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 SLC35A5Q9BS91 424 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 TRIM8Q9BZR9 551 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 SEMA4CQ9C0C4 833 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 EPS8L2Q9H6S3 715 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 COPS7AQ9UBW8 275 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 DTX4Q9Y2E6 619 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 FRYQ5TBA9 3013 aa14.07□□□□□ -0.16
CMC1-201ENST00000334841 PRAMEF2O60811 474 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 COQ9O75208 318 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 ESRRAP11474 423 aaPredicted RBP14.06□□□□□ -0.16
CMC1-201ENST00000334841 EMDP50402 254 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 PRR5P85299 388 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 EXT1Q16394 746 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 DCAF10Q5QP82 559 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 SAXO2Q658L1 398 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 RNF111Q6ZNA4 994 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 GPR155Q7Z3F1 870 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 TRIML2Q8N7C3 387 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 PCYOX1LQ8NBM8 494 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 NUP43Q8NFH3 380 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 OR56A1Q8NGH5 318 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 DNAJB8Q8NHS0 232 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 C16orf52Q8NHV5 167 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 PNPT1Q8TCS8 783 aaKnown RBP14.06□□□□□ -0.16
CMC1-201ENST00000334841 ELP5Q8TE02 316 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 ZFP90Q8TF47 636 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 THAP4Q8WY91 577 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 MOAP1Q96BY2 351 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 NEURL3Q96EH8 262 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 VMP1Q96GC9 406 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 NSL1Q96IY1 281 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 VPS50Q96JG6 964 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 CGREF1Q99674 301 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 CPPED1Q9BRF8 314 aaPredicted RBP14.06□□□□□ -0.16
CMC1-201ENST00000334841 OR10A5Q9H207 317 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 SERHL2Q9H4I8 314 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 EFCAB1Q9HAE3 211 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 C3orf14Q9HBI5 128 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 EQTNQ9NQ60 294 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 GPATCH2Q9NW75 528 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.06□□□□□ -0.16
CMC1-201ENST00000334841 BCAP29Q9UHQ4 241 aa14.06□□□□□ -0.16
CMC1-201ENST00000334841 TRBV11-1A0A0K0K1C0 115 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 PRKNO60260 465 aaPredicted RBP14.05□□□□□ -0.16
CMC1-201ENST00000334841 HMGN2P05204 90 aaKnown RBP14.05□□□□□ -0.16
CMC1-201ENST00000334841 CALB2P22676 271 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 ITPKBP27987 946 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 CHI3L1P36222 383 aaPredicted RBP14.05□□□□□ -0.16
CMC1-201ENST00000334841 PRKAG1P54619 331 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 RPS26P62854 115 aaKnown RBP14.05□□□□□ -0.16
CMC1-201ENST00000334841 ZNF155Q12901 538 aaPredicted RBP14.05□□□□□ -0.16
CMC1-201ENST00000334841 SELPLGQ14242 412 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 EBPQ15125 230 aaKnown RBP14.05□□□□□ -0.16
CMC1-201ENST00000334841 MFSD12Q6NUT3 480 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 C8orf82Q6P1X6 216 aaPredicted RBP14.05□□□□□ -0.16
CMC1-201ENST00000334841 HACD2Q6Y1H2 254 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 FBXO30Q8TB52 745 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 M1APQ8TC57 530 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 ROPN1LQ96C74 230 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 LRRC58Q96CX6 371 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 IKZF5Q9H5V7 419 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 TPT1P8Q9HAU6 139 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 FOLH1BQ9HBA9 442 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 MMP25Q9NPA2 562 aa14.05□□□□□ -0.16
CMC1-201ENST00000334841 HEMK1Q9Y5R4 338 aaPredicted RBP14.05□□□□□ -0.16
CMC1-201ENST00000334841 CROCCQ5TZA2 2017 aa14.04□□□□□ -0.16
CMC1-201ENST00000334841 A0A087WV48 116 aa14.04□□□□□ -0.16
CMC1-201ENST00000334841 TMEM8BA6NDV4 472 aa14.04□□□□□ -0.16
CMC1-201ENST00000334841 ARGFXA6NJG6 315 aa14.04□□□□□ -0.16
CMC1-201ENST00000334841 OR6C76A6NM76 312 aa14.04□□□□□ -0.16
CMC1-201ENST00000334841 BCAS2O75934 225 aaPredicted RBP14.04□□□□□ -0.16
CMC1-201ENST00000334841 UNC5CO95185 931 aa14.04□□□□□ -0.16
CMC1-201ENST00000334841 NPPAP01160 153 aa14.04□□□□□ -0.16
CMC1-201ENST00000334841 ITGAMP11215 1152 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms