RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CPEB2Q7Z5Q1 589 aaKnown RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 GALNT12Q8IXK2 581 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 RNF148Q8N7C7 305 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 OR52R1Q8NGF1 315 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 OR5D16Q8NGK9 328 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 SLC2A12Q8TD20 617 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 ZNF721Q8TF20 911 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 THAP3Q8WTV1 239 aaPredicted RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 FGF11Q92914 225 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 ZBED6CLQ96FA7 236 aaPredicted RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 RBM18Q96H35 190 aaKnown RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 SENP5Q96HI0 755 aaPredicted RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 NSL1Q96IY1 281 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 DCBLD2Q96PD2 775 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 BTNL2Q9UIR0 455 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 LEF1Q9UJU2 399 aaPredicted RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 L3MBTL1Q9Y468 752 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 MED13Q9UHV7 2174 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 IGHV1-45A0A0A0MS14 117 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 SLC22A2O15244 555 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 CREG1O75629 220 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 CALB2P22676 271 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 MMP11P24347 488 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 ITPKBP27987 946 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 ADSLP30566 484 aaPredicted RBP15.37■□□□□ 0.05
SHOX-201ENST00000334060 MPIP34949 423 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 MSX2P35548 267 aaPredicted RBP15.37■□□□□ 0.05
SHOX-201ENST00000334060 TP53BP2Q13625 1128 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 DPY19L1Q2PZI1 675 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 FAM9CQ8IZT9 166 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 APCDD1LQ8NCL9 501 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 OR5P2Q8WZ92 322 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 CLPTM1LQ96KA5 538 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 SLC35A5Q9BS91 424 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 ZNF160Q9HCG1 818 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 ACSS1Q9NUB1 689 aaPredicted RBP15.37■□□□□ 0.05
SHOX-201ENST00000334060 PSME2Q9UL46 239 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 RAXQ9Y2V3 346 aa15.37■□□□□ 0.05
SHOX-201ENST00000334060 RNF103-CHMP3A0A140T963 221 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 CDC14CA4D256 554 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 B2RBV5 119 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 ZNF354AO60765 605 aaPredicted RBP15.36■□□□□ 0.05
SHOX-201ENST00000334060 LINGO3P0C6S8 592 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 ESRRAP11474 423 aaPredicted RBP15.36■□□□□ 0.05
SHOX-201ENST00000334060 IL10P22301 178 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 RPL3P39023 403 aaKnown RBP15.36■□□□□ 0.05
SHOX-201ENST00000334060 PEX19P40855 299 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.36■□□□□ 0.05
SHOX-201ENST00000334060 LRIF1Q5T3J3 769 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 FCRLBQ6BAA4 426 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 MRGPREQ86SM8 312 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 C9orf40Q8IXQ3 194 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 VWA5B2Q8N398 1253 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 DPP10Q8N608 796 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 ZSCAN1Q8NBB4 408 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 FAM156AQ8NDB6 213 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 NCLNQ969V3 563 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 LRRC58Q96CX6 371 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 FAM192AQ9GZU8 254 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 EPS8L2Q9H6S3 715 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 RNPEPL1Q9HAU8 725 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 ZCCHC3Q9NUD5 404 aaKnown RBP15.36■□□□□ 0.05
SHOX-201ENST00000334060 GIMAP4Q9NUV9 329 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 ZNF639Q9UID6 485 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 FBXL4Q9UKA2 621 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 C21orf140B9A014 251 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 IGKV3-11P04433 115 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 CD82P27701 267 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 MXRA7P84157 204 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 DESI1Q6ICB0 168 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 C8orf82Q6P1X6 216 aaPredicted RBP15.36■□□□□ 0.05
SHOX-201ENST00000334060 TMEM64Q6YI46 380 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 ZNF615Q8N8J6 731 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 OR4N2Q8NGD1 307 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 GOT1L1Q8NHS2 421 aaPredicted RBP15.36■□□□□ 0.05
SHOX-201ENST00000334060 PSMA8Q8TAA3 256 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 ZFP90Q8TF47 636 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 METTL21AQ8WXB1 218 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 RAB8BQ92930 207 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 CMTM5Q96DZ9 223 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 ITCHQ96J02 903 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 CGREF1Q99674 301 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 CMTM6Q9NX76 183 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 P4HTMQ9NXG6 502 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 TAS2R1Q9NYW7 299 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 NXT1Q9UKK6 140 aaKnown RBP15.36■□□□□ 0.05
SHOX-201ENST00000334060 ANGPTL2Q9UKU9 493 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 PCDHGA6Q9Y5G7 932 aa15.36■□□□□ 0.05
SHOX-201ENST00000334060 URB1O60287 2271 aaKnown RBP15.35■□□□□ 0.05
SHOX-201ENST00000334060 LOC102723996A0A087X1L8 192 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 PRAMEF27A3QJZ7 478 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 HMGN2P05204 90 aaKnown RBP15.35■□□□□ 0.05
SHOX-201ENST00000334060 SLC6A2P23975 617 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 PRDX6P30041 224 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 CCT3P49368 545 aaKnown RBP15.35■□□□□ 0.05
SHOX-201ENST00000334060 EMDP50402 254 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 RAPSNQ13702 412 aa15.35■□□□□ 0.05
SHOX-201ENST00000334060 LASP1Q14847 261 aaKnown RBP15.35■□□□□ 0.05
SHOX-201ENST00000334060 ELAVL1Q15717 326 aaKnown RBP15.35■□□□□ 0.05
SHOX-201ENST00000334060 ANXA8L1Q5VT79 327 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms