RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 GIN1Q9NXP7 522 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 SCN3BQ9NY72 215 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 CLCA2Q9UQC9 943 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 TPRKBQ9Y3C4 175 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 SLC9B1P1A6NJY1 282 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 AHCYL1O43865 530 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 SRPX2O60687 465 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-201ENST00000331456 SLITRK5O94991 958 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 AGXTP21549 392 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 MAN2A2P49641 1150 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 CXCR4P61073 352 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 HPCAP84074 193 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 FUT5Q11128 374 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 NEDD8Q15843 81 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 FAM214AQ32MH5 1076 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 C6orf132Q5T0Z8 1188 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 CDC73Q6P1J9 531 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 ALDH16A1Q8IZ83 802 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 OR2L13Q8N349 312 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 OR7G2Q8NG99 324 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 CNIH3Q8TBE1 160 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 TCTN2Q96GX1 697 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 PINK1Q9BXM7 581 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 CACYBPQ9HB71 228 aaKnown RBP13.12□□□□□ -0.31
TRAIP-201ENST00000331456 FAM60AQ9NP50 221 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 RHCGQ9UBD6 479 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 SLC13A4Q9UKG4 626 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 LMO7DNF2Z398 122 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 DNAJB6O75190 326 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 CPNE6O95741 557 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 OXSR1O95747 527 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-201ENST00000331456 GPR75O95800 540 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 ALPPP05187 535 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 H1F0P07305 194 aaKnown RBP13.12□□□□□ -0.31
TRAIP-201ENST00000331456 JUNBP17275 347 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-201ENST00000331456 CXCL12P48061 93 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 C21orf59P57076 290 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 RAB38P57729 211 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 SHC2P98077 582 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 PMS2P3Q13401 168 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 MAD2L1BPQ15013 274 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-201ENST00000331456 NDUFA9Q16795 377 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 FGD3Q5JSP0 725 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 TCTN3Q6NUS6 607 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 MFSD12Q6NUT3 480 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 GPR153Q6NV75 609 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 NIPAL1Q6NVV3 410 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 FAM92BQ6ZTR7 304 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 PRSS41Q7RTY9 318 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 TMEFF1Q8IYR6 380 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 OR9Q2Q8NGE9 314 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 GIMAP5Q96F15 307 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 NMNAT1Q9HAN9 279 aaPredicted RBP13.12□□□□□ -0.31
TRAIP-201ENST00000331456 STARD5Q9NSY2 213 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 RLIMQ9NVW2 624 aa13.12□□□□□ -0.31
TRAIP-201ENST00000331456 GOLGA4Q13439 2230 aaKnown RBP13.12□□□□□ -0.31
TRAIP-201ENST00000331456 SCN3AQ9NY46 2000 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 E9PQ18 207 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 FAAHO00519 579 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 CYR61O00622 381 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 FFAR1O14842 300 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 KIF1CO43896 1103 aaKnown RBP13.11□□□□□ -0.31
TRAIP-201ENST00000331456 MAPK10P53779 464 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 CSNK2BP67870 215 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 ZP2Q05996 745 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 RAB39AQ14964 217 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 DEFB110Q30KQ9 67 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 DCST1Q5T197 706 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 LAIR2Q6ISS4 152 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 Q7L0L9 218 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 CLVS1Q8IUQ0 354 aaPredicted RBP13.11□□□□□ -0.31
TRAIP-201ENST00000331456 UBALD2Q8IYN6 164 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 PARP8Q8N3A8 854 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 DHRS1Q96LJ7 313 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 NODALQ96S42 347 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 CXorf21Q9HAI6 301 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 KCNE3Q9Y6H6 103 aa13.11□□□□□ -0.31
TRAIP-201ENST00000331456 TDRD6O60522 2096 aaKnown RBP13.11□□□□□ -0.31
TRAIP-201ENST00000331456 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 PTGES3LE9PB15 166 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 SGK494L7N484 410 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 ZNF701M0R085 212 aaPredicted RBP13.1□□□□□ -0.31
TRAIP-201ENST00000331456 SYT5O00445 386 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 UGT2B17O75795 530 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 LGI1O95970 557 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 ATP1B1P05026 303 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 CBLP22681 906 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 EPHA2P29317 976 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 GGT2P36268 569 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 DEFB133Q30KQ1 61 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 PROX2Q3B8N5 592 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 ZNF628Q5EBL2 1059 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 ZNF311Q5JNZ3 666 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 WDR45BQ5MNZ6 344 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 OGFOD3Q6PK18 319 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 FAM111BQ6SJ93 734 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 B3GNT8Q7Z7M8 397 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 C17orf82Q86X59 251 aaPredicted RBP13.1□□□□□ -0.31
TRAIP-201ENST00000331456 SPARTQ8N0X7 666 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms