RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 DVL2O14641 736 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 CASC3O15234 703 aaKnown RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 HRGP04196 525 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 TCRBP04435 133 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 HSD3B1P14060 373 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 HSD3B2P26439 372 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 NUP62P37198 522 aaPredicted RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 GIPRP48546 466 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 SRP9P49458 86 aaKnown RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 DGKGP49619 791 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 BEX3Q00994 111 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 MC1RQ01726 317 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 EIF2B5Q13144 721 aaKnown RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 ZNF177Q13360 481 aaPredicted RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 ST3GAL2Q16842 350 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 VASNQ6EMK4 673 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 CXorf57Q6NSI4 855 aaKnown RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 PIAS4Q8N2W9 510 aaPredicted RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 DBF4BQ8NFT6 615 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 OR4D11Q8NGI4 311 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 OR8D4Q8NGM9 314 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 OR5M3Q8NGP4 307 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 SLC7A13Q8TCU3 470 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 PTP4A1Q93096 173 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 CHFRQ96EP1 664 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 UROC1Q96N76 676 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 WFDC6Q9BQY6 131 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 MVB12BQ9H7P6 319 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 NMRK2Q9NPI5 230 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 GULP1Q9UBP9 304 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 FCF1Q9Y324 198 aaKnown RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 EXOSC1Q9Y3B2 195 aaKnown RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 CD8B2A6NJW9 211 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 H0YIV9 168 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 EEF1E1O43324 174 aaKnown RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 PI15O43692 258 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 GPR37L1O60883 481 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 OAZ2O95190 189 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 HLA-DPB1P04440 258 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 EIF4EP06730 217 aaKnown RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 CD8BP10966 210 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 TPMTP51580 245 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 RHOAP61586 193 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 CDK5Q00535 292 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 ZNF155Q12901 538 aaPredicted RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 PRSS53Q2L4Q9 553 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 SLC36A2Q495M3 483 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 NHLRC3Q5JS37 347 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 C16orf59Q7L2K0 433 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 SLC30A8Q8IWU4 369 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 GPR135Q8IZ08 494 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 LILRB1Q8NHL6 650 aaPredicted RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 NPLOC4Q8TAT6 608 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 ACOT12Q8WYK0 555 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 COQ10AQ96MF6 247 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 SGK2Q9HBY8 427 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 TMEM161AQ9NX61 479 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 SCP2D1Q9UJQ7 156 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 FBXW2Q9UKT8 454 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 CLCA2Q9UQC9 943 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 FAM170BA6NMN3 283 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 M0QZ92 97 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 M0R233 179 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 KPNA5O15131 536 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 PRODHO43272 600 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 CCND3P30281 292 aaPredicted RBP12.08□□□□□ -0.48
CCDC60-201ENST00000327554 HNF1BP35680 557 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 SPAM1P38567 509 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 RFX3P48380 749 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 ZP1P60852 638 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 DSTNP60981 165 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 RAB8AP61006 207 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 RPL6Q02878 288 aaKnown RBP12.08□□□□□ -0.48
CCDC60-201ENST00000327554 TAP2Q03519 686 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 EOGTQ5NDL2 527 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 GRHL2Q6ISB3 625 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 REEP3Q6NUK4 255 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 GET4Q7L5D6 327 aaPredicted RBP12.08□□□□□ -0.48
CCDC60-201ENST00000327554 OVCH2Q7RTZ1 564 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 PRICKLE2Q7Z3G6 844 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 LHFPL3Q86UP9 236 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 THOC6Q86W42 341 aaKnown RBP12.08□□□□□ -0.48
CCDC60-201ENST00000327554 LRRC28Q86X40 367 aaPredicted RBP12.08□□□□□ -0.48
CCDC60-201ENST00000327554 TTLQ8NG68 377 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 OR6K2Q8NGY2 324 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 RAET1EQ8TD07 263 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 SGTBQ96EQ0 304 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 TEFMQ96QE5 360 aaKnown RBP12.08□□□□□ -0.48
CCDC60-201ENST00000327554 LINC00597Q9H2U6 94 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 OSGEPL1Q9H4B0 414 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 CBLCQ9ULV8 474 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 NPTNQ9Y639 398 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 DOCK6Q96HP0 2047 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 SLC22A23A1A5C7 686 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 FURINP09958 794 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 ZDHHC11BP0C7U3 371 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 AP1S2P56377 157 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 PDE7AQ13946 482 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 GSG1Q2KHT4 349 aa12.08□□□□□ -0.48
CCDC60-201ENST00000327554 IDNKQ5T6J7 187 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms