RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SLCO4C1Q6ZQN7 724 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 CCDC190Q86UF4 302 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF655Q8N720 491 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 OR52P1PQ8NH57 321 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 SLC38A5Q8WUX1 472 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 IRF7Q92985 503 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 WBP2Q969T9 261 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 OR4K3Q96R72 315 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 ZIC5Q96T25 663 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 CD180Q99467 661 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 MKRN2Q9H000 416 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 MRPS30Q9NP92 439 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 PHPT1Q9NRX4 125 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 NLGN3Q9NZ94 848 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 DDCP20711 480 aa12.08□□□□□ -0.47
DNMT3A-202ENST00000321117 DNASE1P24855 282 aa12.08□□□□□ -0.47
DNMT3A-202ENST00000321117 RAB8AP61006 207 aa12.08□□□□□ -0.47
DNMT3A-202ENST00000321117 CCSMST1Q4G0I0 132 aa12.08□□□□□ -0.47
DNMT3A-202ENST00000321117 EIPR1Q53HC9 387 aa12.08□□□□□ -0.47
DNMT3A-202ENST00000321117 LRRTM4Q86VH4 590 aa12.08□□□□□ -0.47
DNMT3A-202ENST00000321117 TMEM25Q86YD3 366 aa12.08□□□□□ -0.47
DNMT3A-202ENST00000321117 FAM46AQ96IP4 442 aaKnown RBP12.08□□□□□ -0.47
DNMT3A-202ENST00000321117 ADAP2Q9NPF8 381 aa12.08□□□□□ -0.47
DNMT3A-202ENST00000321117 RBFOX1Q9NWB1 397 aaKnown RBP12.08□□□□□ -0.47
DNMT3A-202ENST00000321117 WNT6Q9Y6F9 365 aa12.08□□□□□ -0.47
DNMT3A-202ENST00000321117 URADA6NGE7 173 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 POLR1CO15160 346 aaPredicted RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 F11P03951 625 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 PSMD4P55036 377 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 MAP4K2Q12851 820 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 MPP7Q5T2T1 576 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 SLC30A6Q6NXT4 461 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 OR5H6Q8NGV6 325 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 CPEB1Q9BZB8 566 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 RC3H2Q9HBD1 1191 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 CNIH4Q9P003 139 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 MARK1Q9P0L2 795 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 ALG5Q9Y673 324 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 ZAR1LA6NP61 321 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 GFYI3L273 518 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 DSCR3O14972 297 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 ALX3O95076 343 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 LHCGRP22888 699 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 PRPH2P23942 346 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 FAUP35544 74 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 STXBP1P61764 594 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 PLK5Q496M5 336 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 ARMC6Q6NXE6 501 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 GID4Q8IVV7 300 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 PHC2Q8IXK0 858 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 PGBD3Q8N328 593 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 CLSTN3Q9BQT9 956 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 CACNG6Q9BXT2 260 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 TDP1Q9NUW8 608 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 FEZF1A0PJY2 475 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 ADAMTS4O75173 837 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 TRIM3O75382 744 aaPredicted RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 ARL6IP5O75915 188 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 RCBTB2O95199 551 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 PIPP12273 146 aaPredicted RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 MLLT3P42568 568 aaPredicted RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 GPR4P46093 362 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 CCR4P51679 360 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 SNRPGP62308 76 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 RPS25P62851 125 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 FAPQ12884 760 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 ZNHIT3Q15649 155 aaPredicted RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 RNF165Q6ZSG1 346 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 TMEM173Q86WV6 379 aaPredicted RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 RASGEF1AQ8N9B8 481 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 OR5D16Q8NGK9 328 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 MSANTD3Q96H12 275 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 OPALINQ96PE5 141 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 FUZQ9BT04 418 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 GTPBP2Q9BX10 602 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 SAP130Q9H0E3 1048 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 IL20RAQ9UHF4 553 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 MUTYHQ9UIF7 546 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 MGAT4AQ9UM21 535 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 IRAK3Q9Y616 596 aa12.08□□□□□ -0.48
DNMT3A-202ENST00000321117 TMEM88BA6NKF7 163 aa12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 ACP5P13686 325 aa12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 ZNF8P17098 575 aaPredicted RBP12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 ELAVL4P26378 380 aaKnown RBP12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 CMPK1P30085 196 aa12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 GBX2P52951 348 aaPredicted RBP12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 MRPL58Q14197 206 aaKnown RBP12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 SYPL1Q16563 259 aa12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 RNF44Q7L0R7 432 aa12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 CEACAM19Q7Z692 300 aa12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 DNAJA4Q8WW22 397 aaPredicted RBP12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 APH1BQ8WW43 257 aa12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 ING5Q8WYH8 240 aa12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 TRMT2BQ96GJ1 504 aaKnown RBP12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 RIPOR3Q96MK2 946 aa12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 WDR45Q9Y484 360 aa12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 FOXE1O00358 373 aaPredicted RBP12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 AXIN1O15169 862 aa12.07□□□□□ -0.48
DNMT3A-202ENST00000321117 RGS9O75916 674 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms