RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 PCDHGB1Q9Y5G3 927 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 A8MVJ9 347 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 EMC8O43402 210 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 TNFSF14O43557 240 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 H1F0P07305 194 aaKnown RBP7.12□□□□□ -1.27
IFT88-201ENST00000319980 TYRP1P17643 537 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 CBLP22681 906 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 PSMB9P28065 219 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 C21orf33P30042 268 aaPredicted RBP7.12□□□□□ -1.27
IFT88-201ENST00000319980 MASP1P48740 699 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 XKP51811 444 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 NFATC3Q12968 1075 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 BNIP3Q12983 259 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 EIF2B5Q13144 721 aaKnown RBP7.12□□□□□ -1.27
IFT88-201ENST00000319980 RUNX2Q13950 521 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 C6orf132Q5T0Z8 1188 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 ZNF770Q6IQ21 691 aaPredicted RBP7.12□□□□□ -1.27
IFT88-201ENST00000319980 KLHL17Q6TDP4 642 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 ZNF438Q7Z4V0 828 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 SHISA5Q8N114 240 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 FAM46DQ8NEK8 389 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 RHOXF1Q8NHV9 184 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 NT5CQ8TCD5 201 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 SLC7A13Q8TCU3 470 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 RERGQ96A58 199 aaPredicted RBP7.12□□□□□ -1.27
IFT88-201ENST00000319980 FKBP10Q96AY3 582 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 ZG16BQ96DA0 208 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 TM4SF19Q96DZ7 209 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 ZFYVE21Q9BQ24 234 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 COPS4Q9BT78 406 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 TPSD1Q9BZJ3 242 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 CCNB1IP1Q9NPC3 277 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 TMEM74BQ9NUR3 256 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 POT1Q9NUX5 634 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 EVA1BQ9NVM1 165 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 VCANP13611 3396 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 URADA6NGE7 173 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 C2orf74A8MZ97 194 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 H0YGG7 62 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 B3GALT2O43825 422 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 FOSL2P15408 326 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 CHMP24386 653 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 ELAVL4P26378 380 aaKnown RBP7.12□□□□□ -1.27
IFT88-201ENST00000319980 PXNP49023 591 aaPredicted RBP7.12□□□□□ -1.27
IFT88-201ENST00000319980 ARF3P61204 181 aaPredicted RBP7.12□□□□□ -1.27
IFT88-201ENST00000319980 PPP1CAP62136 330 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 ID2Q02363 134 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 FZD2Q14332 565 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 GNA13Q14344 377 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 CEBPEQ15744 281 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 CCDC85BQ15834 202 aaPredicted RBP7.12□□□□□ -1.27
IFT88-201ENST00000319980 PRSS48Q7RTY5 328 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 PRSS41Q7RTY9 318 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 DEFB119Q8N690 84 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 CAMKVQ8NCB2 501 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 SIMC1Q8NDZ2 872 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 OR6T1Q8NGN1 323 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 SFXN5Q8TD22 340 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 DOK4Q8TEW6 326 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 GAB3Q8WWW8 586 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 KLHL6Q8WZ60 621 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 C10orf90Q96M02 699 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 OR7D2Q96RA2 312 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 SPATA5L1Q9BVQ7 753 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 OCEL1Q9H607 264 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 ACOT13Q9NPJ3 140 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 WSB2Q9NYS7 404 aaPredicted RBP7.12□□□□□ -1.27
IFT88-201ENST00000319980 KCMF1Q9P0J7 381 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 PILRAQ9UKJ1 303 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 DAPP1Q9UN19 280 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 SLC9A8Q9Y2E8 581 aa7.12□□□□□ -1.27
IFT88-201ENST00000319980 MRPS2Q9Y399 296 aaKnown RBP7.12□□□□□ -1.27
IFT88-201ENST00000319980 SPEGQ15772 3267 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 ARHGEF17Q96PE2 2063 aaPredicted RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 TRIM64BA6NI03 449 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 MBTPS2O43462 519 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 BCAS1O75363 584 aaPredicted RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 UGT2B17O75795 530 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 SOX14O95416 240 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 EPPINO95925 133 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 SMIM10L1P0DMW3 83 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 CHRNB1P11230 501 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 ALOX12P18054 663 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 TLX1P31314 330 aaPredicted RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 CCR5P51681 352 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 CSNK2BP67870 215 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 TNFRSF17Q02223 184 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 HHEXQ03014 270 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 MVKQ03426 396 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 CHRNEQ04844 493 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 CRTC2Q53ET0 693 aaPredicted RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 DEPDC4Q8N2C3 294 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 LRRC25Q8N386 305 aaPredicted RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 SLC16A11Q8NCK7 471 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 OR7G2Q8NG99 324 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 OR4K14Q8NGD5 310 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 BBS10Q8TAM1 723 aa7.11□□□□□ -1.27
IFT88-201ENST00000319980 IPCEF1Q8WWN9 437 aaPredicted RBP7.11□□□□□ -1.27
IFT88-201ENST00000319980 MOAP1Q96BY2 351 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms