RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 GOT1L1Q8NHS2 421 aaPredicted RBP13.02□□□□□ -0.33
RPP40-201ENST00000319533 DOK4Q8TEW6 326 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 DIO2Q92813 273 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 ISL2Q96A47 359 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 JSRP1Q96MG2 331 aaPredicted RBP13.02□□□□□ -0.33
RPP40-201ENST00000319533 MTERF1Q99551 399 aaKnown RBP13.02□□□□□ -0.33
RPP40-201ENST00000319533 CXorf21Q9HAI6 301 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 JKAMPQ9P055 326 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 FETUBQ9UGM5 382 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 C15orf38-AP3S2A0A0A6YYH1 394 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 C2orf92A0A1B0GVN3 265 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 MBD3L4A6NDZ8 208 aaPredicted RBP13.01□□□□□ -0.33
RPP40-201ENST00000319533 MBD3L3A6NE82 208 aaPredicted RBP13.01□□□□□ -0.33
RPP40-201ENST00000319533 MBD3L5A6NJ08 208 aaPredicted RBP13.01□□□□□ -0.33
RPP40-201ENST00000319533 FOXE1O00358 373 aaPredicted RBP13.01□□□□□ -0.33
RPP40-201ENST00000319533 RIPK2O43353 540 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 LRATO95237 230 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 GOSR1O95249 250 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 IL18BPO95998 194 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 IL2RAP01589 272 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 FAM58BPP0C7Q3 252 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 NR2F6P10588 404 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 EPXP11678 715 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 H2AFXP16104 143 aaPredicted RBP13.01□□□□□ -0.33
RPP40-201ENST00000319533 CASP3P42574 277 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 MAGEA12P43365 314 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 WNT3P56703 355 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 FBXW4P57775 412 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 ADAM8P78325 824 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 SORDQ00796 357 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 SETDB1Q15047 1291 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 PFKFB4Q16877 469 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 TSNAXIP1Q2TAA8 658 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 CNPY4Q8N129 248 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 TEX9Q8N6V9 391 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 ZNF615Q8N8J6 731 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 L3MBTL4Q8NA19 623 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 C17orf47Q8NEP4 570 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 MBD3L2Q8NHZ7 208 aaPredicted RBP13.01□□□□□ -0.33
RPP40-201ENST00000319533 WDR20Q8TBZ3 569 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 DCAKDQ8WVC6 231 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 ADIPOR1Q96A54 375 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 HSPBAP1Q96EW2 488 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 RILPQ96NA2 401 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 C15orf41Q9Y2V0 281 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 TNPO3Q9Y5L0 923 aaKnown RBP13.01□□□□□ -0.33
RPP40-201ENST00000319533 NPFFR2Q9Y5X5 522 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 MPDZO75970 2070 aa13.01□□□□□ -0.33
RPP40-201ENST00000319533 GLOD5A6NK44 160 aa13□□□□□ -0.33
RPP40-201ENST00000319533 TRIM49D1C9J1S8 452 aa13□□□□□ -0.33
RPP40-201ENST00000319533 ATE1O95260 518 aa13□□□□□ -0.33
RPP40-201ENST00000319533 AIFM1O95831 613 aa13□□□□□ -0.33
RPP40-201ENST00000319533 SNRPAP09012 282 aaKnown RBP13□□□□□ -0.33
RPP40-201ENST00000319533 RBP1P09455 135 aa13□□□□□ -0.33
RPP40-201ENST00000319533 COL6A2P12110 1019 aa13□□□□□ -0.33
RPP40-201ENST00000319533 TACR1P25103 407 aa13□□□□□ -0.33
RPP40-201ENST00000319533 SSTR4P31391 388 aa13□□□□□ -0.33
RPP40-201ENST00000319533 PIK3CGP48736 1102 aa13□□□□□ -0.33
RPP40-201ENST00000319533 TMED10P49755 219 aaKnown RBP13□□□□□ -0.33
RPP40-201ENST00000319533 ALDH18A1P54886 795 aaKnown RBP13□□□□□ -0.33
RPP40-201ENST00000319533 PHEXP78562 749 aa13□□□□□ -0.33
RPP40-201ENST00000319533 PCBP2Q15366 365 aaKnown RBP eCLIP13□□□□□ -0.33
RPP40-201ENST00000319533 BICRALQ6AI39 1079 aa13□□□□□ -0.33
RPP40-201ENST00000319533 OR52E8Q6IFG1 317 aa13□□□□□ -0.33
RPP40-201ENST00000319533 METTL2BQ6P1Q9 378 aaKnown RBP13□□□□□ -0.33
RPP40-201ENST00000319533 TMEM81Q6P7N7 255 aa13□□□□□ -0.33
RPP40-201ENST00000319533 TMEM64Q6YI46 380 aa13□□□□□ -0.33
RPP40-201ENST00000319533 KIF18BQ86Y91 864 aa13□□□□□ -0.33
RPP40-201ENST00000319533 EIF1ADQ8N9N8 165 aaKnown RBP13□□□□□ -0.33
RPP40-201ENST00000319533 UCN3Q969E3 161 aa13□□□□□ -0.33
RPP40-201ENST00000319533 REPS1Q96D71 796 aa13□□□□□ -0.33
RPP40-201ENST00000319533 MTBPQ96DY7 904 aa13□□□□□ -0.33
RPP40-201ENST00000319533 WDYHV1Q96HA8 205 aa13□□□□□ -0.33
RPP40-201ENST00000319533 TMEM41AQ96HV5 264 aa13□□□□□ -0.33
RPP40-201ENST00000319533 GNRHR2Q96P88 292 aa13□□□□□ -0.33
RPP40-201ENST00000319533 UGT2B28Q9BY64 529 aa13□□□□□ -0.33
RPP40-201ENST00000319533 GSX1Q9H4S2 264 aaPredicted RBP13□□□□□ -0.33
RPP40-201ENST00000319533 CALHM2Q9HA72 323 aa13□□□□□ -0.33
RPP40-201ENST00000319533 WDR41Q9HAD4 459 aa13□□□□□ -0.33
RPP40-201ENST00000319533 CPSF2Q9P2I0 782 aaKnown RBP13□□□□□ -0.33
RPP40-201ENST00000319533 TMCO1Q9UM00 188 aa13□□□□□ -0.33
RPP40-201ENST00000319533 A0A1W2PS29 197 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 TUBAL3A6NHL2 446 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 PGRMC2O15173 223 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 SMIM24O75264 130 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 CDH16O75309 829 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 TRAPPC6AO75865 159 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 SEMA3DO95025 777 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 RAF1P04049 648 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 CT62P0C5K7 136 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 FAM153BP0C7A2 387 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 NAGAP17050 411 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 BMP7P18075 431 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 S1PR1P21453 382 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 CTSSP25774 331 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 OPRM1P35372 400 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 DGKQP52824 942 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 RPP38P78345 283 aaKnown RBP12.99□□□□□ -0.33
RPP40-201ENST00000319533 DEFB113Q30KQ7 82 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 FAM153CQ494X1 144 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms