RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 OR6C70A6NIJ9 312 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 SNTNA6NMZ2 147 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 ERVH48-1M5A8F1 160 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 RTCAO00442 366 aaKnown RBP18.03■□□□□ 0.48
RTN4-201ENST00000317610 C19orf57Q0VDD7 668 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 GRIN2CQ14957 1233 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 MLC1Q15049 377 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 MZT2BQ6NZ67 158 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 CNIH2Q6PI25 160 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 TRAPPC5Q8IUR0 188 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 ZNF557Q8N988 423 aaPredicted RBP18.03■□□□□ 0.48
RTN4-201ENST00000317610 ZBED6CLQ96FA7 236 aaPredicted RBP18.03■□□□□ 0.48
RTN4-201ENST00000317610 LRIG1Q96JA1 1093 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 ZDHHC5Q9C0B5 715 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 ZCCHC2Q9C0B9 1178 aaKnown RBP18.03■□□□□ 0.48
RTN4-201ENST00000317610 DPEP2Q9H4A9 486 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 RERGLQ9H628 205 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 ACSS1Q9NUB1 689 aaPredicted RBP18.03■□□□□ 0.48
RTN4-201ENST00000317610 GIMAP4Q9NUV9 329 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 ALG5Q9Y673 324 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 C17orf113A0A1B0GUU1 675 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 LRRTM2O43300 516 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 EPPINO95925 133 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 C1QBP02746 253 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 LIMS3P0CW19 117 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 LIMS4P0CW20 117 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 CCT3P49368 545 aaKnown RBP18.03■□□□□ 0.48
RTN4-201ENST00000317610 TRIQKQ629K1 86 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 TRMT11Q7Z4G4 463 aaKnown RBP18.03■□□□□ 0.48
RTN4-201ENST00000317610 UBE2J2Q8N2K1 259 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 Q8N402 240 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 C19orf18Q8NEA5 215 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 CYB5D2Q8WUJ1 264 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 IRF7Q92985 503 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 PRRC1Q96M27 445 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 PLA2G12AQ9BZM1 189 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 OR2AG1Q9H205 316 aa18.03■□□□□ 0.48
RTN4-201ENST00000317610 LRRK1Q38SD2 2015 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 SMIM30A4D0T7 59 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 KDM4EB2RXH2 506 aaPredicted RBP18.02■□□□□ 0.48
RTN4-201ENST00000317610 ZNF780AO75290 641 aaPredicted RBP18.02■□□□□ 0.48
RTN4-201ENST00000317610 OR12D1P0DN82 309 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 TYRP14679 529 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 CLDN20P56880 219 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 LSM11P83369 360 aaKnown RBP eCLIP18.02■□□□□ 0.48
RTN4-201ENST00000317610 PAMR1Q6UXH9 720 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 IL17FQ96PD4 163 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 F2RL3Q96RI0 385 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 COQ7Q99807 217 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 ATF6BQ99941 703 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 OR51I1Q9H343 314 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 TOR4AQ9NXH8 423 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 SAGE1Q9NXZ1 904 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 ITM2BQ9Y287 266 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 SLC9A8Q9Y2E8 581 aa18.02■□□□□ 0.48
RTN4-201ENST00000317610 TGM5O43548 720 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 LILRB3O75022 631 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 LRG1P02750 347 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 CCNYL3P0C7X3 344 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 PRKAR1AP10644 381 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 MTNR1AP48039 350 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 SYCE2Q6PIF2 218 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 ZNF547Q8IVP9 402 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 ARIH2OSQ8N7S6 290 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 ANKRD53Q8N9V6 530 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 SORCS1Q8WY21 1168 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 QRFPRQ96P65 431 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 KCNJ15Q99712 375 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 TMEM43Q9BTV4 400 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 MTG2Q9H4K7 406 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 PELI2Q9HAT8 420 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 BCL2L10Q9HD36 194 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 B3GAT2Q9NPZ5 323 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 LHX9Q9NQ69 397 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 C5AR2Q9P296 337 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 COMMD3Q9UBI1 195 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 A0A0G2JMP0 313 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 SYN1P17600 705 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 EVX1P49640 407 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 CAV3P56539 151 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 SP3Q02447 781 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 POM121L1PQ3SYA9 428 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 PARS2Q7L3T8 475 aaKnown RBP18.01■□□□□ 0.47
RTN4-201ENST00000317610 TMEM145Q8NBT3 493 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 OR6T1Q8NGN1 323 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 BBS10Q8TAM1 723 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 EXOSC8Q96B26 276 aaKnown RBP18.01■□□□□ 0.47
RTN4-201ENST00000317610 SLC35G5Q96KT7 338 aa18.01■□□□□ 0.47
RTN4-201ENST00000317610 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.01■□□□□ 0.471e-7■■□□□ 12.1
RTN4-201ENST00000317610 SGK494L7N484 410 aa18■□□□□ 0.47
RTN4-201ENST00000317610 CASKO14936 926 aa18■□□□□ 0.47
RTN4-201ENST00000317610 LYRM1O43325 122 aa18■□□□□ 0.47
RTN4-201ENST00000317610 HPGDSO60760 199 aa18■□□□□ 0.47
RTN4-201ENST00000317610 APOL3O95236 402 aa18■□□□□ 0.47
RTN4-201ENST00000317610 PAPLNO95428 1278 aa18■□□□□ 0.47
RTN4-201ENST00000317610 ALDH1A1P00352 501 aa18■□□□□ 0.47
RTN4-201ENST00000317610 PSKH1P11801 424 aa18■□□□□ 0.47
RTN4-201ENST00000317610 IL12RB1P42701 662 aa18■□□□□ 0.47
RTN4-201ENST00000317610 ARPC4P59998 168 aa18■□□□□ 0.47
RTN4-201ENST00000317610 P2RY14Q15391 338 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms