RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 PTGES3Q15185 160 aaKnown RBP13.1□□□□□ -0.31
VAMP2-201ENST00000316509 GPAT3Q53EU6 434 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 LAIR1Q6GTX8 287 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 NIPAL1Q6NVV3 410 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 ARMC6Q6NXE6 501 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 KLHL17Q6TDP4 642 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 DNAJC22Q8N4W6 341 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 FAM46DQ8NEK8 389 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 OR9A2Q8NGT5 310 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 C9orf43Q8TAL5 461 aaPredicted RBP13.1□□□□□ -0.31
VAMP2-201ENST00000316509 ADAMTS15Q8TE58 950 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 TANKQ92844 425 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 CRELD1Q96HD1 420 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 PRRC1Q96M27 445 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 Q96MT0 163 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 COPS4Q9BT78 406 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 FNDC11Q9BVV2 318 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 UCK1Q9HA47 277 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 PLGRKTQ9HBL7 147 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 ZNF226Q9NYT6 803 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 CNOT2Q9NZN8 540 aaKnown RBP13.1□□□□□ -0.31
VAMP2-201ENST00000316509 SLC13A4Q9UKG4 626 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 NDRG2Q9UN36 371 aaKnown RBP13.1□□□□□ -0.31
VAMP2-201ENST00000316509 A4GNTQ9UNA3 340 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 IFT52Q9Y366 437 aa13.1□□□□□ -0.31
VAMP2-201ENST00000316509 LAMA2P24043 3122 aaKnown RBP13.09□□□□□ -0.31
VAMP2-201ENST00000316509 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 A0A087WV62 115 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 SH3PXD2BA1X283 911 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 H0YGG7 62 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 SLC22A1O15245 554 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 INMTO95050 263 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 MT-ND2P03891 347 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 ALPPP05187 535 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 C8orf89P0DMQ9 161 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 PORP16435 677 aaPredicted RBP13.09□□□□□ -0.31
VAMP2-201ENST00000316509 IGFBP4P22692 258 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 PRKAR1BP31321 381 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 IFNGR2P38484 337 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 ARF3P61204 181 aaPredicted RBP13.09□□□□□ -0.31
VAMP2-201ENST00000316509 DUSP2Q05923 314 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 KLHL35Q6PF15 583 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 DEF8Q6ZN54 512 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 TRIM73Q86UV7 250 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 PARGQ86W56 976 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 OR2L13Q8N349 312 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 TOR1AIP2Q8NFQ8 470 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 TSTD1Q8NFU3 115 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 KLHL6Q8WZ60 621 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 YIPF6Q96EC8 236 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 GIMAP5Q96F15 307 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 EVA1AQ9H8M9 152 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 MTHFD2LQ9H903 347 aaPredicted RBP13.09□□□□□ -0.31
VAMP2-201ENST00000316509 CACYBPQ9HB71 228 aaKnown RBP13.09□□□□□ -0.31
VAMP2-201ENST00000316509 CLN6Q9NWW5 311 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 KLHL28Q9NXS3 571 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 DUSP12Q9UNI6 340 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 MRPS17Q9Y2R5 130 aaKnown RBP13.09□□□□□ -0.31
VAMP2-201ENST00000316509 TRANK1O15050 2925 aa13.09□□□□□ -0.31
VAMP2-201ENST00000316509 TRBV4-1A0A0J9YWV2 114 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 A0A1W2PPW3 197 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 OR5K3A6NET4 321 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 EFCAB10A6NFE3 127 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 GABARAPO95166 117 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 CDK1P06493 297 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 GSTM3P21266 225 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 CHMP24386 653 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 MC3RP41968 323 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 SNRPGP62308 76 aaKnown RBP13.08□□□□□ -0.31
VAMP2-201ENST00000316509 TFF2Q03403 129 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 TBCEQ15813 527 aaPredicted RBP13.08□□□□□ -0.31
VAMP2-201ENST00000316509 FAM214AQ32MH5 1076 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 ZNF750Q32MQ0 723 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 FGD3Q5JSP0 725 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 TMEM31Q5JXX7 168 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 SLC37A2Q8TED4 501 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 GAB3Q8WWW8 586 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 GTPBP3Q969Y2 492 aaKnown RBP13.08□□□□□ -0.31
VAMP2-201ENST00000316509 ARHGDIGQ99819 225 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 GPR174Q9BXC1 333 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 NAA50Q9GZZ1 169 aaKnown RBP13.08□□□□□ -0.31
VAMP2-201ENST00000316509 PRO3102Q9H379 93 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 SEMA6CQ9H3T2 930 aa13.08□□□□□ -0.31
VAMP2-201ENST00000316509 PLXND1Q9Y4D7 1925 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 OR10H3O60404 316 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 CPMP14384 443 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 CTSKP43235 329 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 IDH2P48735 452 aaKnown RBP13.08□□□□□ -0.32
VAMP2-201ENST00000316509 FUT5Q11128 374 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 MOGQ16653 247 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 DEFB134Q4QY38 66 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 ZNF311Q5JNZ3 666 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 SLX4IPQ5VYV7 408 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 MFSD12Q6NUT3 480 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 C16orf62Q7Z3J2 963 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 IQCHQ86VS3 1027 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 ZNF687Q8N1G0 1237 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 OR4D11Q8NGI4 311 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 VANGL1Q8TAA9 524 aaPredicted RBP13.08□□□□□ -0.32
VAMP2-201ENST00000316509 GGHQ92820 318 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms