RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 PCDHGA6Q9Y5G7 932 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 GALNT10Q86SR1 603 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF695Q8IW36 515 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 OR1J4Q8NGS1 313 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 C1orf226A1L170 272 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 SMAD9O15198 467 aaKnown RBP14.8□□□□□ -0.04
HCFC1-201ENST00000310441 TFP02787 698 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 CSF2P04141 144 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 RNH1P13489 461 aaKnown RBP14.8□□□□□ -0.04
HCFC1-201ENST00000310441 GNB3P16520 340 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 SYT14Q8NB59 555 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 CHDHQ8NE62 594 aaPredicted RBP14.8□□□□□ -0.04
HCFC1-201ENST00000310441 PAQR5Q9NXK6 330 aaPredicted RBP14.8□□□□□ -0.04
HCFC1-201ENST00000310441 MEN1O00255 615 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 JMJD7P0C870 316 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 UAP1L1Q3KQV9 507 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 AGAP7PQ5VUJ5 663 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 AGAP6Q5VW22 663 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 TLDC1Q6P9B6 456 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 TBC1D20Q96BZ9 403 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 AGAP4Q96P64 663 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 PRTFDC1Q9NRG1 225 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 TMEM248Q9NWD8 314 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 CPED1A4D0V7 1026 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 A8MUA0 341 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 FBLP22087 321 aaKnown RBP14.8□□□□□ -0.04
HCFC1-201ENST00000310441 MTNR1AP48039 350 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 DGKQP52824 942 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 TICAM1Q8IUC6 712 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 GPR137CQ8N3F9 429 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 SLC25A44Q96H78 314 aaPredicted RBP14.8□□□□□ -0.04
HCFC1-201ENST00000310441 SAMD11Q96NU1 681 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 TMEM88BA6NKF7 163 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 ITM2AO43736 263 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 DUX1O43812 170 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 KIAA0513O60268 411 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 GPR137BO60478 399 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 ALDOAP04075 364 aaKnown RBP14.8□□□□□ -0.04
HCFC1-201ENST00000310441 PPA1Q15181 289 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 MAMDC2Q7Z304 686 aaPredicted RBP14.8□□□□□ -0.04
HCFC1-201ENST00000310441 OR4E2Q8NGC2 313 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 FRZBQ92765 325 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 CCM2LQ9NUG4 571 aaPredicted RBP14.8□□□□□ -0.04
HCFC1-201ENST00000310441 PLEKHM1Q9Y4G2 1056 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 SCN11AQ9UI33 1791 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 KNDC1Q76NI1 1749 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 PLIN4Q96Q06 1357 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 NPC1O15118 1278 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 POP7O75817 140 aaKnown RBP14.8□□□□□ -0.04
HCFC1-201ENST00000310441 CST3P01034 146 aaPredicted RBP14.8□□□□□ -0.04
HCFC1-201ENST00000310441 LSSP48449 732 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 NPRL3Q12980 569 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 SGCAQ16586 387 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 PROX2Q3B8N5 592 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 TMEM198Q66K66 360 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 C22orf42Q6IC83 251 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 LGALS12Q96DT0 336 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 COQ10AQ96MF6 247 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 TTYH3Q9C0H2 523 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 LUZP4Q9P127 313 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 A0A0A6YYH2 397 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 A6NJ64 397 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 NANOGP8Q6NSW7 305 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 RNF111Q6ZNA4 994 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 NANOGQ9H9S0 305 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 NENFQ9UMX5 172 aa14.8□□□□□ -0.04
HCFC1-201ENST00000310441 A0A1W2PPW3 197 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 A6NLC8 198 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 BOLA2-SMG1P6H3BVE0 249 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 MMP2P08253 660 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 FOXN2P32314 431 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 PAFAH1B3Q15102 231 aaKnown RBP14.79□□□□□ -0.04
HCFC1-201ENST00000310441 C2orf27AQ580R0 203 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 MANEALQ5VSG8 457 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 NETO2Q8NC67 525 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 ZDHHC1Q8WTX9 485 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 MAN2C1Q9NTJ4 1040 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 SARDHQ9UL12 918 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 SLC6A14Q9UN76 642 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 PREPP48147 710 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 HACD2Q6Y1H2 254 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 LANCL3Q6ZV70 420 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 TAAR8Q969N4 342 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 DAZAP1Q96EP5 407 aaKnown RBP14.79□□□□□ -0.04
HCFC1-201ENST00000310441 OR1F2PQ96R84 312 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 J3QRK9 145 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 DLX3O60479 287 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 FASLGP48023 281 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF136P52737 540 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF33BQ06732 778 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 ESCO2Q56NI9 601 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 FAM199XQ6PEV8 388 aaPredicted RBP14.79□□□□□ -0.04
HCFC1-201ENST00000310441 CMIPQ8IY22 773 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 IQCF1Q8N6M8 205 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 FBXL8Q96CD0 374 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 TLR9Q9NR96 1032 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 TSPAN6O43657 245 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 ASGR2P07307 311 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 PCLAFQ15004 111 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 SUMF2Q8NBJ7 301 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms