RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 MLF1P58340 268 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 EBPQ15125 230 aaKnown RBP16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 LTB4RQ15722 352 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 LACTB2Q53H82 288 aaPredicted RBP16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 OR4F3Q6IEY1 312 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 ZCCHC12Q6PEW1 402 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 TMEM107Q6UX40 140 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 ZNF551Q7Z340 670 aaPredicted RBP16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 TAGAPQ8N103 731 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 KIF2BQ8N4N8 673 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 CPSF7Q8N684 471 aaKnown RBP16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 SIRT6Q8N6T7 355 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 OR52R1Q8NGF1 315 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 OR56A1Q8NGH5 318 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 SLC22A8Q8TCC7 542 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 C10orf82Q8WW14 230 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 ABHD17AQ96GS6 310 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 MARK4Q96L34 752 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 CCDC115Q96NT0 180 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 MS4A4EQ96PG1 132 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 OR52E6Q96RD3 313 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 STMN3Q9NZ72 180 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 ZNF223Q9UK11 482 aaPredicted RBP16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 CAPN14A8MX76 684 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 ACOX3O15254 700 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 EMC8O43402 210 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 SNX3O60493 162 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 CBX7O95931 251 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 KRT16P08779 473 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 DRD4P21917 467 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 SSTR4P31391 388 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 TMED10P49755 219 aaKnown RBP16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 MRPS35P82673 323 aaKnown RBP16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 TXNL4AP83876 142 aaKnown RBP16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 ZNHIT3Q15649 155 aaPredicted RBP16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 PRSS53Q2L4Q9 553 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 VPS26BQ4G0F5 336 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 TRMT12Q53H54 448 aaKnown RBP16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 FHL5Q5TD97 284 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 PAOXQ6QHF9 649 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 FAM111BQ6SJ93 734 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 C9orf40Q8IXQ3 194 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 ZADH2Q8N4Q0 377 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 OR7G2Q8NG99 324 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 DNAJB8Q8NHS0 232 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 GOT1L1Q8NHS2 421 aaPredicted RBP16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 C16orf52Q8NHV5 167 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 KAT2AQ92830 837 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 TEX37Q96LM6 180 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 ELAC2Q9BQ52 826 aaKnown RBP16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 WWTR1Q9GZV5 400 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 FAM107BQ9H098 131 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 ZNF385DQ9H6B1 395 aa16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 HEMK1Q9Y5R4 338 aaPredicted RBP16.61■□□□□ 0.25
SSSCA1-201ENST00000309328 HRKO00198 91 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 UPK1AO00322 258 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 PSMG1O95456 288 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 C6orf47O95873 294 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 CLPSP04118 112 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 FAM87AP0C7U9 286 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 IL12AP29459 219 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 TRHRP34981 398 aaPredicted RBP16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 PPICP45877 212 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 SSR4P51571 173 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 WNT3P56703 355 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 MAPRE2Q15555 327 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 MAPKAPK3Q16644 382 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 SPDYE7PQ495Y7 208 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 BLOC1S3Q6QNY0 202 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 OPN5Q6U736 354 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 ZNF321PQ8N8H1 164 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 HAS2Q92819 552 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 HSPBAP1Q96EW2 488 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 ITCHQ96J02 903 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 BTBD9Q96Q07 612 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 GAL3ST4Q96RP7 486 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 SLC25A18Q9H1K4 315 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 CDCP1Q9H5V8 836 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 SNX8Q9Y5X2 465 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 CACNA1GO43497 2377 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 PCSK5Q92824 1860 aa16.6■□□□□ 0.25
SSSCA1-201ENST00000309328 CACNA1BQ00975 2339 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 FRG2CA6NGY1 282 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 CCDC154A6NI56 674 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 MASP2O00187 686 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 SCN2BO60939 215 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 ITGA10O75578 1167 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 FAM107AO95990 144 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 DRD5P21918 477 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 MAGEA8P43361 318 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 CCT3P49368 545 aaKnown RBP16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 PRIM2P49643 509 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 EMDP50402 254 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 HBA1P69905 142 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 RAPSNQ13702 412 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 AGKQ53H12 422 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 PIGGQ5H8A4 983 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 ASB18Q6ZVZ8 466 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 TMEM156Q8N614 296 aa16.59■□□□□ 0.25
SSSCA1-201ENST00000309328 ZNF441Q8N8Z8 693 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms