RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 WWP2O00308 870 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 BCAS2O75934 225 aaPredicted RBP20.72■□□□□ 0.91
HOXD4-201ENST00000306324 C6orf47O95873 294 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 F10P00742 488 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 ABCB1P08183 1280 aaPredicted RBP20.72■□□□□ 0.91
HOXD4-201ENST00000306324 MLF1P58340 268 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 DUSP8Q13202 625 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 MLC1Q15049 377 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 EBPQ15125 230 aaKnown RBP20.72■□□□□ 0.91
HOXD4-201ENST00000306324 HLA-DQA1Q5Y7H0 255 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 SZRD1Q7Z422 152 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 BEST3Q8N1M1 668 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 OR5P2Q8WZ92 322 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 TM9SF4Q92544 642 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 LMF1Q96S06 567 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 WWTR1Q9GZV5 400 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 NSRP1Q9H0G5 558 aaKnown RBP20.72■□□□□ 0.91
HOXD4-201ENST00000306324 SLC25A18Q9H1K4 315 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 PLA2G3Q9NZ20 509 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 ABI3Q9P2A4 366 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 MYOTQ9UBF9 498 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 CFL2Q9Y281 166 aa20.72■□□□□ 0.91
HOXD4-201ENST00000306324 C2orf92A0A1B0GVN3 265 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 PLOD2O00469 737 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 FCHO1O14526 889 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 ATXN7O15265 892 aaPredicted RBP20.71■□□□□ 0.91
HOXD4-201ENST00000306324 ITGA10O75578 1167 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 GPX3P22352 226 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 WNT3P56703 355 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 PHC1P78364 1004 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 FHL5Q5TD97 284 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 CPLX4Q7Z7G2 160 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 ANKRD46Q86W74 232 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 CLECL1Q8IZS7 167 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 LGI4Q8N135 537 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 VPS37AQ8NEZ2 397 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 NUBPLQ8TB37 319 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 ELAC2Q9BQ52 826 aaKnown RBP20.71■□□□□ 0.91
HOXD4-201ENST00000306324 DTX4Q9Y2E6 619 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 SNX8Q9Y5X2 465 aa20.71■□□□□ 0.91
HOXD4-201ENST00000306324 A0A087WV62 115 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 DYTNA2CJ06 578 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 UPK1AO00322 258 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 RNASET2O00584 256 aaKnown RBP20.7■□□□□ 0.9
HOXD4-201ENST00000306324 NME6O75414 186 aaPredicted RBP20.7■□□□□ 0.9
HOXD4-201ENST00000306324 OR2J2O76002 312 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 WDPCPO95876 746 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 PGRP06401 933 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 POLR2JP52435 117 aaKnown RBP20.7■□□□□ 0.9
HOXD4-201ENST00000306324 ARG2P78540 354 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 SQLEQ14534 574 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 ANXA8L1Q5VT79 327 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 METTL21CQ5VZV1 264 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 OR52E6Q96RD3 313 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 FAM120CQ9NX05 1096 aaKnown RBP20.7■□□□□ 0.9
HOXD4-201ENST00000306324 ANKRD10Q9NXR5 420 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 TAS2R9Q9NYW1 312 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 PRODH2Q9UF12 536 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 PCDHGB4Q9UN71 923 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 C19orf53Q9UNZ5 99 aaPredicted RBP20.7■□□□□ 0.9
HOXD4-201ENST00000306324 CHD6Q8TD26 2715 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 EML6Q6ZMW3 1958 aa20.7■□□□□ 0.9
HOXD4-201ENST00000306324 PRSS51A0A1B0GVH4 220 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 COQ9O75208 318 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 IL6P05231 212 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 MRPL19P49406 292 aaKnown RBP20.69■□□□□ 0.9
HOXD4-201ENST00000306324 EMDP50402 254 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 ATP4BP51164 291 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 PRKAG1P54619 331 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 IGFL2Q6UWQ7 119 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 SPATA21Q7Z572 469 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 ARMC10Q8N2F6 343 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 OR2L13Q8N349 312 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 ZADH2Q8N4Q0 377 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 C10orf82Q8WW14 230 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 ITPAQ9BY32 194 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 RABEP2Q9H5N1 569 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 C3orf14Q9HBI5 128 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 NEUROD4Q9HD90 331 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 CCDC167Q9P0B6 97 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 YARS2Q9Y2Z4 477 aaKnown RBP20.69■□□□□ 0.9
HOXD4-201ENST00000306324 HEMK1Q9Y5R4 338 aaPredicted RBP20.69■□□□□ 0.9
HOXD4-201ENST00000306324 FAM208BQ5VWN6 2430 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 EXPH5Q8NEV8 1989 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 FAM234BA2RU67 622 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 SCN2BO60939 215 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 CPSF4O95639 269 aaKnown RBP20.69■□□□□ 0.9
HOXD4-201ENST00000306324 DRD4P21917 467 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 ZFP36L2P47974 494 aaKnown RBP20.69■□□□□ 0.9
HOXD4-201ENST00000306324 CD97P48960 835 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 NR0B1P51843 470 aaKnown RBP20.69■□□□□ 0.9
HOXD4-201ENST00000306324 HBA1P69905 142 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 IRX1P78414 480 aaPredicted RBP20.69■□□□□ 0.9
HOXD4-201ENST00000306324 NNATQ16517 81 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 IGFL3Q6UXB1 125 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 TMEM156Q8N614 296 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 OR4A15Q8NGL6 344 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 RASL10BQ96S79 203 aa20.69■□□□□ 0.9
HOXD4-201ENST00000306324 SIRT3Q9NTG7 399 aaPredicted RBP20.69■□□□□ 0.9
HOXD4-201ENST00000306324 CSAG2Q9Y5P2 127 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms