RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ZNF223Q9UK11 482 aaPredicted RBP25.25■■□□□ 1.63
HDAC3-201ENST00000305264 C19orf53Q9UNZ5 99 aaPredicted RBP25.25■■□□□ 1.63
HDAC3-201ENST00000305264 TAF4O00268 1085 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 HPP00738 406 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 T-ENOLP0DO92 83 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 CDC20Q12834 499 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 BTBD16Q32M84 506 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 PROSER1Q86XN7 944 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 ART5Q96L15 291 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 IP6K3Q96PC2 410 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 SLC39A3Q9BRY0 314 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 SLC35A5Q9BS91 424 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 BCAP29Q9UHQ4 241 aa25.25■■□□□ 1.63
HDAC3-201ENST00000305264 FXYD1O00168 92 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 EMC8O43402 210 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 ERN1O75460 977 aaKnown RBP25.24■■□□□ 1.63
HDAC3-201ENST00000305264 IFI6P09912 130 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 UQCRC2P22695 453 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 NUDT2P50583 147 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 SLC37A1P57057 533 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 TLE3Q04726 772 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 TRMT5Q32P41 509 aaKnown RBP25.24■■□□□ 1.63
HDAC3-201ENST00000305264 KIF2BQ8N4N8 673 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 ZNF615Q8N8J6 731 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 SFXN5Q8TD22 340 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 PHF12Q96QT6 1004 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 OR10A5Q9H207 317 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 C3orf14Q9HBI5 128 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 NTMQ9P121 344 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 COPS7AQ9UBW8 275 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 TRBV5-3A0A0A0MS03 114 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 PSMG1O95456 288 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 ZCCHC18P0CG32 403 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 PRKAG1P54619 331 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 TP53BP2Q13625 1128 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 CAPRIN1Q14444 709 aaKnown RBP25.24■■□□□ 1.63
HDAC3-201ENST00000305264 CRTC2Q53ET0 693 aaPredicted RBP25.24■■□□□ 1.63
HDAC3-201ENST00000305264 PLAG1Q6DJT9 500 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 TRIML2Q8N7C3 387 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 PCYOX1LQ8NBM8 494 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 NUP43Q8NFH3 380 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 FBXO27Q8NI29 283 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 NSL1Q96IY1 281 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 VPS50Q96JG6 964 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 SEMA4CQ9C0C4 833 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 DTX4Q9Y2E6 619 aa25.24■■□□□ 1.63
HDAC3-201ENST00000305264 ESRRAP11474 423 aaPredicted RBP25.23■■□□□ 1.63
HDAC3-201ENST00000305264 PRR5P85299 388 aa25.23■■□□□ 1.63
HDAC3-201ENST00000305264 Q0VFX4 171 aa25.23■■□□□ 1.63
HDAC3-201ENST00000305264 EXT1Q16394 746 aa25.23■■□□□ 1.63
HDAC3-201ENST00000305264 RNF111Q6ZNA4 994 aa25.23■■□□□ 1.63
HDAC3-201ENST00000305264 OR7G1Q8NGA0 311 aa25.23■■□□□ 1.63
HDAC3-201ENST00000305264 EFCAB1Q9HAE3 211 aa25.23■■□□□ 1.63
HDAC3-201ENST00000305264 EQTNQ9NQ60 294 aa25.23■■□□□ 1.63
HDAC3-201ENST00000305264 GIMAP1-GIMAP5A0A087WTJ2 511 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 C16orf52Q8NHV5 167 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 ZFP90Q8TF47 636 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 GIMAP5Q96F15 307 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 VMP1Q96GC9 406 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 MS4A4EQ96PG1 132 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 TRIM8Q9BZR9 551 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 PRAMEF2O60811 474 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 ITPKBP27987 946 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 CHI3L1P36222 383 aaPredicted RBP25.22■■□□□ 1.63
HDAC3-201ENST00000305264 EMDP50402 254 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 DCAF10Q5QP82 559 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 CCDC81Q6ZN84 652 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 C9orf40Q8IXQ3 194 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 OR56A1Q8NGH5 318 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 PNPT1Q8TCS8 783 aaKnown RBP25.22■■□□□ 1.63
HDAC3-201ENST00000305264 THAP4Q8WY91 577 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 MOAP1Q96BY2 351 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 LRRC58Q96CX6 371 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 CGREF1Q99674 301 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 EPS8L2Q9H6S3 715 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 MED13Q9UHV7 2174 aa25.22■■□□□ 1.63
HDAC3-201ENST00000305264 TRBV11-1A0A0K0K1C0 115 aa25.21■■□□□ 1.63
HDAC3-201ENST00000305264 CALB2P22676 271 aa25.21■■□□□ 1.63
HDAC3-201ENST00000305264 SAXO2Q658L1 398 aa25.21■■□□□ 1.63
HDAC3-201ENST00000305264 DNAJB8Q8NHS0 232 aa25.21■■□□□ 1.63
HDAC3-201ENST00000305264 GPATCH2Q9NW75 528 aa25.21■■□□□ 1.63
HDAC3-201ENST00000305264 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.21■■□□□ 1.63
HDAC3-201ENST00000305264 PRKNO60260 465 aaPredicted RBP25.2■■□□□ 1.63
HDAC3-201ENST00000305264 COQ9O75208 318 aa25.2■■□□□ 1.63
HDAC3-201ENST00000305264 HMGN2P05204 90 aaKnown RBP25.2■■□□□ 1.63
HDAC3-201ENST00000305264 CASP9P55211 416 aa25.2■■□□□ 1.63
HDAC3-201ENST00000305264 RPS26P62854 115 aaKnown RBP25.2■■□□□ 1.63
HDAC3-201ENST00000305264 LRRC69Q6ZNQ3 347 aa25.2■■□□□ 1.63
HDAC3-201ENST00000305264 C6orf120Q7Z4R8 191 aa25.2■■□□□ 1.63
HDAC3-201ENST00000305264 WDR53Q7Z5U6 358 aaPredicted RBP25.2■■□□□ 1.63
HDAC3-201ENST00000305264 M1APQ8TC57 530 aa25.2■■□□□ 1.63
HDAC3-201ENST00000305264 ELP5Q8TE02 316 aa25.2■■□□□ 1.63
HDAC3-201ENST00000305264 NEURL3Q96EH8 262 aa25.2■■□□□ 1.63
HDAC3-201ENST00000305264 TPT1P8Q9HAU6 139 aa25.2■■□□□ 1.63
HDAC3-201ENST00000305264 MMP25Q9NPA2 562 aa25.2■■□□□ 1.63
HDAC3-201ENST00000305264 HEMK1Q9Y5R4 338 aaPredicted RBP25.2■■□□□ 1.63
HDAC3-201ENST00000305264 ARGFXA6NJG6 315 aa25.2■■□□□ 1.62
HDAC3-201ENST00000305264 BCAS2O75934 225 aaPredicted RBP25.2■■□□□ 1.62
HDAC3-201ENST00000305264 ART3Q13508 389 aa25.2■■□□□ 1.62
HDAC3-201ENST00000305264 LASP1Q14847 261 aaKnown RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms