RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 GAL3ST4Q96RP7 486 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 CCT8L2Q96SF2 557 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 CDCP1Q9H5V8 836 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 C3orf14Q9HBI5 128 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 PRODH2Q9UF12 536 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 C19orf53Q9UNZ5 99 aaPredicted RBP22.72■■□□□ 1.23
HOXC9-201ENST00000303450 ITPR1Q14643 2758 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 ERVH48-1M5A8F1 160 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 COQ9O75208 318 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 CPSF4O95639 269 aaKnown RBP22.72■■□□□ 1.23
HOXC9-201ENST00000303450 IFI6P09912 130 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 HBA1P69905 142 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 KCNAB2Q13303 367 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 MEP1AQ16819 746 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 TIGD2Q4W5G0 525 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 ABHD17BQ5VST6 288 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 HLA-DQA1Q5Y7H0 255 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 TCTN3Q6NUS6 607 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 BLOC1S3Q6QNY0 202 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 LINC00696Q6ZRV3 163 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 OR2L13Q8N349 312 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 OR4A15Q8NGL6 344 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 NUBPLQ8TB37 319 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 ADNPQ9H2P0 1102 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 SAR1AQ9NR31 198 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 TAS2R9Q9NYW1 312 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 UPK1AO00322 258 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 NR5A2O00482 541 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 SOX11P35716 441 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 LRRC74AQ0VAA2 488 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 DUSP8Q13202 625 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 RCAN2Q14206 197 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 EBPQ15125 230 aaKnown RBP22.71■■□□□ 1.23
HOXC9-201ENST00000303450 ACER2Q5QJU3 275 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 SZRD1Q7Z422 152 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 PIGWQ7Z7B1 504 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 PSMA8Q8TAA3 256 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 VPS33AQ96AX1 596 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 SMAD5Q99717 465 aaKnown RBP22.71■■□□□ 1.23
HOXC9-201ENST00000303450 WWTR1Q9GZV5 400 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 LIN28AQ9H9Z2 209 aaKnown RBP22.71■■□□□ 1.23
HOXC9-201ENST00000303450 SIRT3Q9NTG7 399 aaPredicted RBP22.71■■□□□ 1.23
HOXC9-201ENST00000303450 STMN3Q9NZ72 180 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 MYOTQ9UBF9 498 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 BTNL2Q9UIR0 455 aa22.71■■□□□ 1.23
HOXC9-201ENST00000303450 C2orf92A0A1B0GVN3 265 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 CCDC154A6NI56 674 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 EMC8O43402 210 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 CCDC22O60826 627 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 FAM107AO95990 144 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 EMDP50402 254 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 MLF1P58340 268 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 PRR5P85299 388 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 UBAP2LQ14157 1087 aaKnown RBP22.7■■□□□ 1.22
HOXC9-201ENST00000303450 SPDYE7PQ495Y7 208 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 LGI4Q8N135 537 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 SPDL1Q96EA4 605 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 CCDC115Q96NT0 180 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 NPAS2Q99743 824 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 CXorf36Q9H7Y0 433 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 RMND5AQ9H871 391 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 ABI3Q9P2A4 366 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 TUBD1Q9UJT1 453 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 LHX6Q9UPM6 363 aa22.7■■□□□ 1.22
HOXC9-201ENST00000303450 HEMK1Q9Y5R4 338 aaPredicted RBP22.7■■□□□ 1.22
HOXC9-201ENST00000303450 TMEM200CA6NKL6 621 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 WWP2O00308 870 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 FCHO1O14526 889 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 MAN1A2O60476 641 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 SOAT1P35610 550 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 PRKAG1P54619 331 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 MFAP5Q13361 173 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 MAPKAPK3Q16644 382 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 MSANTD1Q6ZTZ1 278 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 NUP43Q8NFH3 380 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 FAM120BQ96EK7 910 aaKnown RBP22.69■■□□□ 1.22
HOXC9-201ENST00000303450 PANX1Q96RD7 426 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 LMF1Q96S06 567 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 NMUR2Q9GZQ4 415 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 EPS8L2Q9H6S3 715 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 ZCCHC3Q9NUD5 404 aaKnown RBP22.69■■□□□ 1.22
HOXC9-201ENST00000303450 PCDHGB7Q9Y5F8 929 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 CNTRLQ7Z7A1 2325 aa22.69■■□□□ 1.22
HOXC9-201ENST00000303450 CCT3P49368 545 aaKnown RBP22.68■■□□□ 1.22
HOXC9-201ENST00000303450 VPS26BQ4G0F5 336 aa22.68■■□□□ 1.22
HOXC9-201ENST00000303450 TMEM64Q6YI46 380 aa22.68■■□□□ 1.22
HOXC9-201ENST00000303450 C16orf47Q6ZP98 133 aaPredicted RBP22.68■■□□□ 1.22
HOXC9-201ENST00000303450 GK5Q6ZS86 529 aa22.68■■□□□ 1.22
HOXC9-201ENST00000303450 ARMC10Q8N2F6 343 aa22.68■■□□□ 1.22
HOXC9-201ENST00000303450 C9orf43Q8TAL5 461 aaPredicted RBP22.68■■□□□ 1.22
HOXC9-201ENST00000303450 ITPAQ9BY32 194 aa22.68■■□□□ 1.22
HOXC9-201ENST00000303450 NTMQ9P121 344 aa22.68■■□□□ 1.22
HOXC9-201ENST00000303450 DTX4Q9Y2E6 619 aa22.68■■□□□ 1.22
HOXC9-201ENST00000303450 ARL2BPQ9Y2Y0 163 aa22.68■■□□□ 1.22
HOXC9-201ENST00000303450 ZNF451Q9Y4E5 1061 aa22.68■■□□□ 1.22
HOXC9-201ENST00000303450 DYTNA2CJ06 578 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 ITGA10O75578 1167 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 OR2J2O76002 312 aa22.67■■□□□ 1.22
HOXC9-201ENST00000303450 ZNF155Q12901 538 aaPredicted RBP22.67■■□□□ 1.22
HOXC9-201ENST00000303450 MTDHQ86UE4 582 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms