RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 XYLT2Q9H1B5 865 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 ABCD2Q9UBJ2 740 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 CBFA2T3O75081 653 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 CD1DP15813 335 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 GADD45AP24522 165 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 GPR85P60893 370 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 CHRFAM7AQ494W8 412 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 TRILQ7L0X0 811 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM173Q86WV6 379 aaPredicted RBP7.42□□□□□ -1.22
SCN9A-201ENST00000303354 SLC35B2Q8TB61 432 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 C16orf78Q8WTQ4 265 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 SYNPO2LQ9H987 977 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 ICKQ9UPZ9 632 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 LOC102723532A0A0G2JNH3 316 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 FAM159BA6NKW6 160 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 ABCB7O75027 752 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 GYPBP06028 91 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 AKR1C4P17516 323 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 MAGEA12P43365 314 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 ACADVLP49748 655 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 EIF2B1Q14232 305 aaKnown RBP7.42□□□□□ -1.22
SCN9A-201ENST00000303354 KLBQ86Z14 1044 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 SDSLQ96GA7 329 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 PSKH2Q96QS6 385 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 ADOQ96SZ5 270 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 FKRPQ9H9S5 495 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 C8orf4Q9NR00 106 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 CPNE7Q9UBL6 633 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 R4GN57 208 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 H0Y8X5 98 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 RAB36O95755 333 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 GABRR1P24046 479 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 STT3AP46977 705 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 ACY1Q03154 408 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM17Q86X19 198 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 UEVLDQ8IX04 471 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 FIBINQ8TAL6 211 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 M0R3H8 397 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 APOC1P02654 83 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 CALCBP10092 127 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 GSK3BP49841 420 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 APOFQ13790 326 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 SWT1Q5T5J6 900 aaKnown RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 UBE2Q1Q7Z7E8 422 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 SIRT6Q8N6T7 355 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 GLB1L3Q8NCI6 653 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 LSM14AQ8ND56 463 aaKnown RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 OR4D6Q8NGJ1 314 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 ROPN1LQ96C74 230 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 C1orf74Q96LT6 269 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 CDCP1Q9H5V8 836 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM184BQ9Y519 407 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 SLIT2O94813 1529 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 PRICKLE3O43900 615 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 HNRNPH3P31942 346 aaKnown RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 GLP1RP43220 463 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 ROR2Q01974 943 aaKnown RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 MLF2Q15773 248 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF750Q32MQ0 723 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 CDNFQ49AH0 187 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF550Q7Z398 422 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM139Q8IV31 216 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 SVOPLQ8N434 492 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 OR5L2Q8NGL0 311 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 IL1F10Q8WWZ1 152 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 OR10A4Q9H209 315 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 DUSP13Q9UII6 198 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 COQ4Q9Y3A0 265 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 OR5K4A6NMS3 321 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 ACTL6BO94805 426 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 ALDOAP04075 364 aaKnown RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TPOP07202 933 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 SLC2A2P11168 524 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 CDK3Q00526 305 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 WSCD2Q2TBF2 565 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 CDKL4Q5MAI5 379 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 SLX4IPQ5VYV7 408 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 ANKRD54Q6NXT1 300 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 ARL14Q8N4G2 192 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 C7orf43Q8WVR3 580 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 PIGCQ92535 297 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TCEAL3Q969E4 200 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 VRK1Q99986 396 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TREM1Q9NP99 234 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 CD93Q9NPY3 652 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 FAM86C1Q9NVL1 165 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 C1orf226A1L170 272 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TRMUO75648 421 aaKnown RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 IFNA21P01568 189 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 LIPCP11150 499 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 RPA2P15927 270 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 HTR6P50406 440 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 MYBPHQ13203 477 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 BICRALQ6AI39 1079 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 OR2T5Q6IEZ7 315 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 PNCKQ6P2M8 343 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 PLBD1Q6P4A8 553 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 OR2T29Q8NH02 315 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 OR5P2Q8WZ92 322 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms