RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 APOFQ13790 326 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 SHBQ15464 509 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 ZNF628Q5EBL2 1059 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 EXOSC6Q5RKV6 272 aaKnown RBP11.26□□□□□ -0.61
TPM3-202ENST00000302206 FHL5Q5TD97 284 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 KDM4DQ6B0I6 523 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 CDC73Q6P1J9 531 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 ZCCHC12Q6PEW1 402 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 TSSK4Q6SA08 328 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 FAM92BQ6ZTR7 304 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 CEP68Q76N32 757 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 SLC25A45Q8N413 288 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 TTC29Q8NA56 475 aaPredicted RBP11.26□□□□□ -0.61
TPM3-202ENST00000302206 ZBTB44Q8NCP5 570 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 OR6C4Q8NGE1 309 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 OR4C15Q8NGM1 316 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 XAGE5Q8WWM1 108 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 PROX1Q92786 737 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 GIMAP5Q96F15 307 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 RMND5BQ96G75 393 aaPredicted RBP11.26□□□□□ -0.61
TPM3-202ENST00000302206 TRNT1Q96Q11 434 aaKnown RBP11.26□□□□□ -0.61
TPM3-202ENST00000302206 OR7D2Q96RA2 312 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 MBOAT4Q96T53 435 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 PIP5K1AQ99755 562 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 TREX2Q9BQ50 279 aaPredicted RBP11.26□□□□□ -0.61
TPM3-202ENST00000302206 FAM192AQ9GZU8 254 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 TOR3AQ9H497 397 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 RUBCNLQ9H714 662 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 FAM118AQ9NWS6 357 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 GIN1Q9NXP7 522 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 C19orf53Q9UNZ5 99 aaPredicted RBP11.26□□□□□ -0.61
TPM3-202ENST00000302206 PCDHGB5Q9Y5G0 923 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 MAGED1Q9Y5V3 778 aaPredicted RBP11.26□□□□□ -0.61
TPM3-202ENST00000302206 TNRC6BQ9UPQ9 1833 aaKnown RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 IGHV1OR21-1A0A087WYE8 117 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 A0A1W2PS29 197 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 ARRDC5A6NEK1 342 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 ZNF860A6NHJ4 632 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 EIF4E1BA6NMX2 242 aaKnown RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 CASC3O15234 703 aaKnown RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 CHST10O43529 356 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 HCRTR1O43613 425 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 DUX1O43812 170 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 HS6ST1O60243 411 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 PLOD3O60568 738 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 UGT2B11O75310 529 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 JRKO75564 520 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 FESP07332 822 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 GNAO1P09471 354 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 MSL3P1P0C860 447 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 GIMD1P0DJR0 217 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 RNH1P13489 461 aaKnown RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 PNLIPP16233 465 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 IGFBP5P24593 272 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 DHPSP49366 369 aaPredicted RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 PRKAG1P54619 331 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 TUBA4AP68366 448 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 OLR1P78380 273 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 SHC2P98077 582 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 BNC1Q01954 994 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 SQSTM1Q13501 440 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 LASP1Q14847 261 aaKnown RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 SYPL1Q16563 259 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 RPS26P11Q5JNZ5 115 aaPredicted RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 ATAD3BQ5T9A4 648 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 PEAR1Q5VY43 1037 aaPredicted RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 HEPHL1Q6MZM0 1159 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 MFSD12Q6NUT3 480 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 MED25Q71SY5 747 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 PRSS41Q7RTY9 318 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 KANSL1Q7Z3B3 1105 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 SZRD1Q7Z422 152 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 PRSS42Q7Z5A4 293 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 ZNF605Q86T29 641 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 KMT5CQ86Y97 462 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 PLXDC1Q8IUK5 500 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 SLC35F3Q8IY50 421 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 ZNF595Q8IYB9 648 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 HS3ST5Q8IZT8 346 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 PIK3C3Q8NEB9 887 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 OR7G2Q8NG99 324 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 GPR32P1Q8NGA4 272 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 OR5D16Q8NGK9 328 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 NCSTNQ92542 709 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 AHCYL2Q96HN2 611 aaKnown RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 FBXL20Q96IG2 436 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 ZNF354BQ96LW1 612 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 TGM7Q96PF1 710 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 DUSP23Q9BVJ7 150 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 AMBRA1Q9C0C7 1298 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 DDX18Q9NVP1 670 aaKnown RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 TUBA8Q9NY65 449 aaPredicted RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 NLGN3Q9NZ94 848 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 NDUFA13Q9P0J0 144 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 PDP1Q9P0J1 537 aaPredicted RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 KCND3Q9UK17 655 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 PILRBQ9UKJ0 227 aa11.25□□□□□ -0.61
TPM3-202ENST00000302206 FAM32AQ9Y421 112 aaKnown RBP11.25□□□□□ -0.61
TPM3-202ENST00000302206 LYVE1Q9Y5Y7 322 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms