RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 PRICKLE4Q2TBC4 344 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 B3GNT6Q6ZMB0 384 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 MEX3BQ6ZN04 569 aaKnown RBP16.76■□□□□ 0.27
TMEM88-201ENST00000301599 RPRMLQ8N4K4 120 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 OR10Q1Q8NGQ4 319 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.76■□□□□ 0.27
TMEM88-201ENST00000301599 TMEM237Q96Q45 408 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 TTYH2Q9BSA4 534 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 BRINP2Q9C0B6 783 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 ZNF446Q9NWS9 450 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 ALKBH4Q9NXW9 302 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 BCAP29Q9UHQ4 241 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 MCM8Q9UJA3 840 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 DNAJC13O75165 2243 aa16.76■□□□□ 0.27
TMEM88-201ENST00000301599 TRIM3O75382 744 aaPredicted RBP16.75■□□□□ 0.27
TMEM88-201ENST00000301599 ESRRBO95718 433 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 DRD2P14416 443 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 KRT15P19012 456 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 ALDH9A1P49189 494 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 PKNOX1P55347 436 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 FAM111BQ6SJ93 734 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 PACS2Q86VP3 889 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 CCDC71Q8IV32 467 aaPredicted RBP16.75■□□□□ 0.27
TMEM88-201ENST00000301599 VWA5B2Q8N398 1253 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 GOLGA6L1Q8N7Z2 621 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 ACBD4Q8NC06 268 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 SPPL2AQ8TCT8 520 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 KLHL29Q96CT2 875 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 CCDC126Q96EE4 140 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 L3HYPDHQ96EM0 354 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 HBEGFQ99075 208 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 ANGPTL4Q9BY76 406 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 UCK2Q9BZX2 261 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 ZNF703Q9H7S9 590 aaPredicted RBP16.75■□□□□ 0.27
TMEM88-201ENST00000301599 TNFRSF10DQ9UBN6 386 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 TBK1Q9UHD2 729 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 PCDHGB3Q9Y5G1 929 aa16.75■□□□□ 0.27
TMEM88-201ENST00000301599 LRRC3CA6NJW4 275 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 CDH16O75309 829 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 LRATO95237 230 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 ENO1P06733 434 aaKnown RBP16.74■□□□□ 0.27
TMEM88-201ENST00000301599 GLI4P10075 376 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 GABRA1P14867 456 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 GPX3P22352 226 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 LCP2Q13094 533 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 HSP90B2PQ58FF3 399 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 TCHHL1Q5QJ38 904 aaPredicted RBP16.74■□□□□ 0.27
TMEM88-201ENST00000301599 RTL6Q6ICC9 239 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 NUP54Q7Z3B4 507 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 MMP21Q8N119 569 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 LIX1Q8N485 282 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 EIF1ADQ8N9N8 165 aaKnown RBP16.74■□□□□ 0.27
TMEM88-201ENST00000301599 NEIL3Q8TAT5 605 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 HSPBAP1Q96EW2 488 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 C14orf79Q96F83 325 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 LURAP1Q96LR2 239 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 ZNF597Q96LX8 424 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 MAT2BQ9NZL9 334 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 ZNF639Q9UID6 485 aa16.74■□□□□ 0.27
TMEM88-201ENST00000301599 GNG14A0A1W2PPG7 69 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 NKX2-6A6NCS4 301 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 FAM47E-STBD1D6RA91 191 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 TRAPPC6AO75865 159 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 TOXO94900 526 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 ABCB1P08183 1280 aaPredicted RBP16.73■□□□□ 0.27
TMEM88-201ENST00000301599 CHN1P15882 459 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 ELAVL4P26378 380 aaKnown RBP16.73■□□□□ 0.27
TMEM88-201ENST00000301599 GDF1P27539 372 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 ABCD3P28288 659 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 CASP3P42574 277 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 ZFP36L2P47974 494 aaKnown RBP16.73■□□□□ 0.27
TMEM88-201ENST00000301599 NAA20P61599 178 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 DCAF7P61962 342 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 ACSM2AQ08AH3 577 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 SPIN4Q56A73 249 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 BEND6Q5SZJ8 279 aaPredicted RBP16.73■□□□□ 0.27
TMEM88-201ENST00000301599 C1orf185Q5T7R7 199 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 ACSM2BQ68CK6 577 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 SAMD14Q8IZD0 417 aaPredicted RBP16.73■□□□□ 0.27
TMEM88-201ENST00000301599 ADCY4Q8NFM4 1077 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 MZB1Q8WU39 189 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 CTHRC1Q96CG8 243 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 CNRIP1Q96F85 164 aaPredicted RBP16.73■□□□□ 0.27
TMEM88-201ENST00000301599 LCORQ96JN0 433 aaPredicted RBP16.73■□□□□ 0.27
TMEM88-201ENST00000301599 ZNF681Q96N22 645 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 RILPQ96NA2 401 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 TREX2Q9BQ50 279 aaPredicted RBP16.73■□□□□ 0.27
TMEM88-201ENST00000301599 NXF5Q9H1B4 397 aaKnown RBP16.73■□□□□ 0.27
TMEM88-201ENST00000301599 EPB41L4BQ9H329 900 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 MED4Q9NPJ6 270 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 SPRR3Q9UBC9 169 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 HEY2Q9UBP5 337 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 PRODH2Q9UF12 536 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 UTS2RQ9UKP6 389 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 DLGAP4Q9Y2H0 992 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 FAM215AQ9Y5M1 114 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 CACNA1CQ13936 2221 aa16.73■□□□□ 0.27
TMEM88-201ENST00000301599 A0A1W2PPM1 405 aa16.72■□□□□ 0.27
TMEM88-201ENST00000301599 SERTM1A2A2V5 107 aa16.72■□□□□ 0.27
TMEM88-201ENST00000301599 FAM90A27PA6NNH2 459 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms