RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 C1DQ13901 141 aaKnown RBP23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 TYW3Q6IPR3 259 aaKnown RBP23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 TRIM48Q8IWZ4 208 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 TBC1D19Q8N5T2 526 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 ZBED6CLQ96FA7 236 aaPredicted RBP23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 C3orf14Q9HBI5 128 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 NEUROD4Q9HD90 331 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 NUDT13Q86X67 352 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 PROKR2Q8NFJ6 384 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 JPH3Q8WXH2 748 aaPredicted RBP23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 LRIG1Q96JA1 1093 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 DCLRE1CQ96SD1 692 aaKnown RBP23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 PRR23AA6NEV1 266 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 C4orf51C9J302 202 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 KIAA0355O15063 1070 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 TSPAN19P0C672 248 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 WASP42768 502 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 CCR8P51685 355 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 KRR1Q13601 381 aaKnown RBP23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 GPAT3Q53EU6 434 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 B3GLCTQ6Y288 498 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 PRRG3Q9BZD7 231 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 TMCC2O75069 709 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 FKTNO75072 461 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 NCR1O76036 304 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 MRPS15P82914 257 aaKnown RBP23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 TBRG1Q3YBR2 411 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 CRTC2Q53ET0 693 aaPredicted RBP23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 TOR1AIP1Q5JTV8 583 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 MEDAGQ5VYS4 303 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 OR8K5Q8NH50 307 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 HHIPL1Q96JK4 782 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 P2RX2Q9UBL9 471 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 GPR55Q9Y2T6 319 aaPredicted RBP23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 IRAK3Q9Y616 596 aa23.01■■□□□ 1.27
SPTSSA-201ENST00000298130 A0A1W2PPV9 198 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 FUT5Q11128 374 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 TMEM201Q5SNT2 666 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 TMCO6Q96DC7 493 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 AMDHD1Q96NU7 426 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 FYTTD1Q96QD9 318 aaKnown RBP23■■□□□ 1.27
SPTSSA-201ENST00000298130 PHOX2BQ99453 314 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 FUZQ9BT04 418 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 COMMD3Q9UBI1 195 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 PLEKHB1Q9UF11 243 aaPredicted RBP23■■□□□ 1.27
SPTSSA-201ENST00000298130 KIAA0100Q14667 2235 aaKnown RBP23■■□□□ 1.27
SPTSSA-201ENST00000298130 FABP12A6NFH5 140 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 PDE9AO76083 593 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 ITGB7P26010 798 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 RNF144AP50876 292 aaPredicted RBP23■■□□□ 1.27
SPTSSA-201ENST00000298130 ALDH6A1Q02252 535 aaKnown RBP23■■□□□ 1.27
SPTSSA-201ENST00000298130 MLLT11Q13015 90 aaPredicted RBP23■■□□□ 1.27
SPTSSA-201ENST00000298130 ZNF544Q6NX49 715 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 DGLUCYQ7Z3D6 616 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 RAB43Q86YS6 212 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 SLC30A8Q8IWU4 369 aa23■■□□□ 1.27
SPTSSA-201ENST00000298130 C12orf76Q8N812 135 aaPredicted RBP23■■□□□ 1.27
SPTSSA-201ENST00000298130 C11orf54Q9H0W9 315 aaPredicted RBP23■■□□□ 1.27
SPTSSA-201ENST00000298130 NUFIP1Q9UHK0 495 aaKnown RBP23■■□□□ 1.27
SPTSSA-201ENST00000298130 MN1Q10571 1320 aaPredicted RBP22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 MEIOCA2RUB1 952 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 IGLON5A6NGN9 336 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 CPSF4LA6NMK7 179 aaKnown RBP22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 HMGN2P05204 90 aaKnown RBP22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 FAM214AQ32MH5 1076 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 TMEM107Q6UX40 140 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 NLGN4YQ8NFZ3 816 aaPredicted RBP22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 OR8D4Q8NGM9 314 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 DOK4Q8TEW6 326 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 OR8D1Q8WZ84 308 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 TP53INP1Q96A56 240 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 TRIM43Q96BQ3 446 aaPredicted RBP22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 RNFT2Q96EX2 444 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 PLEKHM1Q9Y4G2 1056 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 RAB36O95755 333 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 PRICKLE2Q7Z3G6 844 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 TRIM69Q86WT6 500 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 OR5K2Q8NHB8 316 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 SLC25A46Q96AG3 418 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 RGMAQ96B86 450 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 ARMC5Q96C12 935 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 ST6GAL2Q96JF0 529 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 DHRS1Q96LJ7 313 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 BBS4Q96RK4 519 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 RHBGQ9H310 441 aa22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 IMP3Q9NV31 184 aaKnown RBP22.99■■□□□ 1.27
SPTSSA-201ENST00000298130 IGKV1-8A0A0C4DH67 115 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 C17orf113A0A1B0GUU1 675 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 FAM47E-STBD1D6RA91 191 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 CSF3P09919 207 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 PYDC2Q56P42 97 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 C1QTNF12Q5T7M4 302 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 MRPL43Q8N983 215 aaKnown RBP22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 OR52P1PQ8NH57 321 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 CXorf40AQ8TE69 158 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 CREB3L4Q8TEY5 395 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 UBASH3BQ8TF42 649 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 OTULINQ96BN8 352 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 LINC00615Q96LM1 132 aaPredicted RBP22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 FERD3LQ96RJ6 166 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms