RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 OR8J1Q8NGP2 316 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 ING5Q8WYH8 240 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 SGTBQ96EQ0 304 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 ACER3Q9NUN7 267 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 ATPIF1Q9UII2 106 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 YIPF1Q9Y548 306 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 A0A1W2PRB8 838 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 PRKYO43930 277 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 MAPKAPK2P49137 400 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 GZMMP51124 257 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 ACVR1Q04771 509 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 SERPINA13PQ6UXR4 307 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 SLC39A11Q8N1S5 342 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 POP5Q969H6 163 aaKnown RBP14.09□□□□□ -0.15
SPIDR-201ENST00000297423 C1orf74Q96LT6 269 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 GINS4Q9BRT9 223 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 C1QTNF3Q9BXJ4 246 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 OR10A4Q9H209 315 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 FOLH1BQ9HBA9 442 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 ZNF282Q9UDV7 671 aaPredicted RBP14.09□□□□□ -0.15
SPIDR-201ENST00000297423 CORO2BQ9UQ03 480 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 ENPP4Q9Y6X5 453 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 SPTBP11277 2137 aa14.09□□□□□ -0.15
SPIDR-201ENST00000297423 TRBV5-3A0A0A0MS03 114 aa14.08□□□□□ -0.15
SPIDR-201ENST00000297423 SH3D21A4FU49 640 aa14.08□□□□□ -0.15
SPIDR-201ENST00000297423 IL1AP01583 271 aa14.08□□□□□ -0.15
SPIDR-201ENST00000297423 PPIBP23284 216 aaKnown RBP14.08□□□□□ -0.15
SPIDR-201ENST00000297423 RNF144AP50876 292 aaPredicted RBP14.08□□□□□ -0.15
SPIDR-201ENST00000297423 FABP5Q01469 135 aa14.08□□□□□ -0.15
SPIDR-201ENST00000297423 CNTN1Q12860 1018 aa14.08□□□□□ -0.15
SPIDR-201ENST00000297423 RTL4Q6ZR62 310 aa14.08□□□□□ -0.15
SPIDR-201ENST00000297423 C9orf62Q8N4C0 152 aa14.08□□□□□ -0.15
SPIDR-201ENST00000297423 CDCA4Q9BXL8 241 aa14.08□□□□□ -0.15
SPIDR-201ENST00000297423 IL26Q9NPH9 171 aa14.08□□□□□ -0.15
SPIDR-201ENST00000297423 PLEKHB1Q9UF11 243 aaPredicted RBP14.08□□□□□ -0.15
SPIDR-201ENST00000297423 ACSL4O60488 711 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 IGLV3-25P01717 112 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 CORO1AP31146 461 aaKnown RBP14.08□□□□□ -0.16
SPIDR-201ENST00000297423 ESPNLQ6ZVH7 1005 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 OR51G2Q8NGK0 314 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 NXPE2Q96DL1 559 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 C2orf49Q9BVC5 232 aaPredicted RBP14.08□□□□□ -0.16
SPIDR-201ENST00000297423 B3GNT4Q9C0J1 378 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 MAGEH1Q9H213 219 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 PIGUQ9H490 435 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 KCNK12Q9HB15 430 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 CNOT2Q9NZN8 540 aaKnown RBP14.08□□□□□ -0.16
SPIDR-201ENST00000297423 IL17CQ9P0M4 197 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 MLXQ9UH92 298 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 FRS3O43559 492 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 GJB5O95377 273 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 SIX6O95475 246 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 ICAM2P13598 275 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 PREPP48147 710 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 WNT4P56705 351 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 VEZF1Q14119 521 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 DSG2Q14126 1118 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 RAET1GQ6H3X3 334 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 CPA6Q8N4T0 437 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 FUZQ9BT04 418 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 TMEM138Q9NPI0 162 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.08□□□□□ -0.16
SPIDR-201ENST00000297423 ALPK2Q86TB3 2170 aa14.08□□□□□ -0.16
SPIDR-201ENST00000297423 OSMP13725 252 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 CDH11P55287 796 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 CLVS2Q5SYC1 327 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 ALG1LQ6GMV1 187 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 ZNF433Q8N7K0 673 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 OR8K5Q8NH50 307 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 SECISBP2Q96T21 854 aaKnown RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 P2RY13Q9BPV8 354 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 NTMT1Q9BV86 223 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 EQTNQ9NQ60 294 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 ZNF69Q9UC07 566 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 BPTFQ12830 3046 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 FAM183AA6NL82 134 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 CFDP00746 253 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 RLN1P04808 185 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 CD79BP40259 229 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 RFX3P48380 749 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 DSTNP60981 165 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 LYPD4Q6UWN0 246 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 PRSS42Q7Z5A4 293 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 ZNF527Q8NB42 609 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 PROKR2Q8NFJ6 384 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 OR10H4Q8NGA5 316 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 TRIM43Q96BQ3 446 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 LINC00052Q96N35 136 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 OR51V1Q9H2C8 321 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 SPNS1Q9H2V7 528 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 IMP3Q9NV31 184 aaKnown RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 GULP1Q9UBP9 304 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 RTCAO00442 366 aaKnown RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 ELK1P19419 428 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 HOXD9P28356 352 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 HOXC13P31276 330 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 ACVR1BP36896 505 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 BDKRB1P46663 353 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 HNMTP50135 292 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 LSM11P83369 360 aaKnown RBP eCLIP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms