RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PRTGQ2VWP7 1150 aa8.6□□□□□ -1.03
PDPN-201ENST00000294489 COLEC12Q5KU26 742 aa8.6□□□□□ -1.03
PDPN-201ENST00000294489 PMS2CLQ68D20 193 aa8.6□□□□□ -1.03
PDPN-201ENST00000294489 ZNF605Q86T29 641 aa8.6□□□□□ -1.03
PDPN-201ENST00000294489 C19orf47Q8N9M1 422 aaKnown RBP8.6□□□□□ -1.03
PDPN-201ENST00000294489 CNIH3Q8TBE1 160 aa8.6□□□□□ -1.03
PDPN-201ENST00000294489 MIPOL1Q8TD10 442 aa8.6□□□□□ -1.03
PDPN-201ENST00000294489 EDAQ92838 391 aa8.6□□□□□ -1.03
PDPN-201ENST00000294489 PITX2Q99697 317 aa8.6□□□□□ -1.03
PDPN-201ENST00000294489 MIR1-1HGQ9H1L0 117 aa8.6□□□□□ -1.03
PDPN-201ENST00000294489 ACER3Q9NUN7 267 aa8.6□□□□□ -1.03
PDPN-201ENST00000294489 UCKL1Q9NWZ5 548 aa8.6□□□□□ -1.03
PDPN-201ENST00000294489 NOL3O60936 208 aaKnown RBP8.59□□□□□ -1.03
PDPN-201ENST00000294489 PVRP15151 417 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 ST6GAL1P15907 406 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 JUNBP17275 347 aaPredicted RBP8.59□□□□□ -1.03
PDPN-201ENST00000294489 C21orf59P57076 290 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 RUNX2Q13950 521 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 PUM1Q14671 1186 aaKnown RBP eCLIP8.59□□□□□ -1.03
PDPN-201ENST00000294489 MAPK11Q15759 364 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 INAVAQ3KP66 663 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 C6orf132Q5T0Z8 1188 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 ABCA7Q8IZY2 2146 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 LRRC25Q8N386 305 aaPredicted RBP8.59□□□□□ -1.03
PDPN-201ENST00000294489 NUP43Q8NFH3 380 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 OR4K14Q8NGD5 310 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 OR9A2Q8NGT5 310 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 ZNF420Q8TAQ5 688 aaPredicted RBP8.59□□□□□ -1.03
PDPN-201ENST00000294489 ELP4Q96EB1 424 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 HRASLS5Q96KN8 279 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 ALPK1Q96QP1 1244 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 NODALQ96S42 347 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 YIPF4Q9BSR8 244 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 FANCEQ9HB96 536 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 BCL2L10Q9HD36 194 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 FAM60AQ9NP50 221 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 TMCC3Q9ULS5 477 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 DAPP1Q9UN19 280 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 GPC6Q9Y625 555 aaPredicted RBP8.59□□□□□ -1.03
PDPN-201ENST00000294489 PCDH15Q96QU1 1955 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 TRMUO75648 421 aaKnown RBP8.59□□□□□ -1.03
PDPN-201ENST00000294489 PDGFBP01127 241 aaPredicted RBP8.59□□□□□ -1.03
PDPN-201ENST00000294489 PROS1P07225 676 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 PTGER1P34995 402 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 MC3RP41968 323 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 FNTBP49356 437 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 LIM2P55344 173 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 SMIM11AP58511 58 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 DUSP2Q05923 314 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 GPAT3Q53EU6 434 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 ATAD3BQ5T9A4 648 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 LAIR2Q6ISS4 152 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 DGLUCYQ7Z3D6 616 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 ZNF761Q86XN6 746 aaPredicted RBP8.59□□□□□ -1.03
PDPN-201ENST00000294489 SPARTQ8N0X7 666 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 SLC25A45Q8N413 288 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 GPR32P1Q8NGA4 272 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 APOBEC4Q8WW27 367 aaKnown RBP8.59□□□□□ -1.03
PDPN-201ENST00000294489 GAB3Q8WWW8 586 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 TCTN2Q96GX1 697 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 CNDP2Q96KP4 475 aaKnown RBP8.59□□□□□ -1.03
PDPN-201ENST00000294489 CCDC3Q9BQI4 270 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 BTBD2Q9BX70 525 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 CCDC90BQ9GZT6 254 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 PILRBQ9UKJ0 227 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 SLC9A8Q9Y2E8 581 aa8.59□□□□□ -1.03
PDPN-201ENST00000294489 A0A0G2JPF8 293 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 ARRDC5A6NEK1 342 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 HNRNPCL2B2RXH8 293 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 HNRNPCL3B7ZW38 293 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 PCDH17O14917 1159 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 HCRTR1O43613 425 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 ASNA1O43681 348 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 GALR3O60755 368 aaPredicted RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 HNRNPCL4P0DMR1 293 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 EPHA2P29317 976 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 SLC5A2P31639 672 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 LIMS1P48059 325 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 XKP51811 444 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 TUBA3CQ13748 450 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 MAD2L1BPQ15013 274 aaPredicted RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 PRAMEF8Q5VWM4 474 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 PRAMEF7Q5VXH5 474 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 ERI1Q8IV48 349 aaKnown RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 P3H2Q8IVL5 708 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 COL26A1Q96A83 441 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 ISOC1Q96CN7 298 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 CD180Q99467 661 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 PSD2Q9BQI7 771 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 SLC24A3Q9HC58 644 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 CALML5Q9NZT1 146 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 KCND3Q9UK17 655 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 LIPT1Q9Y234 373 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 MRPS2Q9Y399 296 aaKnown RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 GOLGA4Q13439 2230 aaKnown RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 PRAMEF27A3QJZ7 478 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 FITM1A5D6W6 292 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 DUXAA6NLW8 204 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 NUDT21O43809 227 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms