RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RASGEF1AQ8N9B8 481 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 BBS10Q8TAM1 723 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 CHFRQ96EP1 664 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 FCRL3Q96P31 734 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 NEDD4LQ96PU5 975 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 CACNG6Q9BXT2 260 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 ERVK13-1Q9NX77 482 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 MMP17Q9ULZ9 603 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 SCML1Q9UN30 329 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 BORCS7-ASMTA0A0B4J1R7 106 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 TMEM150CB9EJG8 249 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 PRAMEF11O60813 436 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 NR2C1P13056 603 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF14P17017 642 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 UQCRC2P22695 453 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 HNRNPFP52597 415 aaKnown RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 RPS13P62277 151 aaKnown RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 GFOD2Q3B7J2 385 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 C1orf210Q8IVY1 113 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 FOXRED2Q8IWF2 684 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 POGLUT1Q8NBL1 392 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF486Q96H40 463 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 MCHR1Q99705 422 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 RIOK2Q9BVS4 552 aaKnown RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 PPIL3Q9H2H8 161 aaKnown RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 MGAT4CQ9UBM8 478 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 FBXO4Q9UKT5 387 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 AGAP5A6NIR3 686 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 BCAS1O75363 584 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 OXSR1O95747 527 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 MSL3P1P0C860 447 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 BCKDHAP12694 445 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 CNR2P34972 360 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 OPRL1P41146 370 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 NIPAL4Q0D2K0 466 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 MAPK14Q16539 360 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC5A11Q8WWX8 675 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 MOAP1Q96BY2 351 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 LHPPQ9H008 270 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 TMEM248Q9NWD8 314 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 RHCGQ9UBD6 479 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 GLS2Q9UI32 602 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 WDR45Q9Y484 360 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 HTTP42858 3142 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 KRBA1A5PL33 1030 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 PRKCGP05129 697 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 CDK4P11802 303 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 ALAS2P22557 587 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 HOXD9P28356 352 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 AGTR2P50052 363 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 PITX1P78337 314 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 CD47Q08722 323 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 FGL1Q08830 312 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 CDKL4Q5MAI5 379 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 LIPJQ5W064 366 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 C22orf42Q6IC83 251 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 ALDH16A1Q8IZ83 802 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 VWA5B2Q8N398 1253 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 KDM1BQ8NB78 822 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 SETD6Q8TBK2 473 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 NUS1Q96E22 293 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 TMEM45AQ9NWC5 275 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 B3GNT3Q9Y2A9 372 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 GGT1P19440 569 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 HOXD12P35452 270 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 OPRD1P41143 372 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR1E2P47887 323 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 EXOC3L2Q2M3D2 409 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 GLT8D1Q68CQ7 371 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 RPL13AP3Q6NVV1 102 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 KCTD9Q7L273 389 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 DGLUCYQ7Z3D6 616 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 CAMKVQ8NCB2 501 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 CASTOR1Q8WTX7 329 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 CPNE2Q96FN4 548 aaPredicted RBP11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 SECISBP2Q96T21 854 aaKnown RBP11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 TBL1XR1Q9BZK7 514 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR51B5Q9H339 312 aa11.27□□□□□ -0.6
SYNGAP1-201ENST00000293748 ADH1BP00325 375 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 HOXC13P31276 330 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 CCKBRP32239 447 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 HK3P52790 923 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 LASP1Q14847 261 aaKnown RBP11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 ABHD13Q7L211 337 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 RABEPKQ7Z6M1 372 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 TMEM151AQ8N4L1 468 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 OR2T33Q8NG76 320 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 CD300LFQ8TDQ1 290 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 OR5P2Q8WZ92 322 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 NT5C3BQ969T7 300 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 OR4K3Q96R72 315 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 PCDHB11Q9Y5F2 797 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 TTC24A2A3L6 582 aaPredicted RBP11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 GMFGO60234 142 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 IGLV3-25P01717 112 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 RHCEP18577 417 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 RBMXP38159 391 aaKnown RBP11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 PLEKHS1Q5SXH7 462 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 DCDC5Q6ZRR9 648 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 LHFPL3Q86UP9 236 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms