RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 STK25O00506 426 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 SLC30A4O14863 429 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 PTGER1P34995 402 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 MLLT3P42568 568 aaPredicted RBP12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 FABP5Q01469 135 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 ZNF628Q5EBL2 1059 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 TYW3Q6IPR3 259 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 PAMR1Q6UXH9 720 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 CD300LDQ6UXZ3 194 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 ZNF730Q6ZMV8 503 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 ABI3BPQ7Z7G0 1075 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 C17orf64Q86WR6 236 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 MORN4Q8NDC4 146 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 OR6T1Q8NGN1 323 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 SLC9A6Q92581 669 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 NUS1Q96E22 293 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 ZBED6CLQ96FA7 236 aaPredicted RBP12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 MED18Q9BUE0 208 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 LHX9Q9NQ69 397 aa12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 PCYT1BQ9Y5K3 369 aaPredicted RBP12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 GOLGA4Q13439 2230 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-201ENST00000286749 CACNB4O00305 520 aaPredicted RBP12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 TBX19O60806 448 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 EPPINO95925 133 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 ACP2P11117 423 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 PSMB5P28074 263 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 FRKP42685 505 aaPredicted RBP12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 MAN2A2P49641 1150 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 SMSP52788 366 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 DEFB103AP81534 67 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 EFNB1P98172 346 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 NDUFA9Q16795 377 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 LCN1P1Q5VSP4 162 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 KREMEN2Q8NCW0 462 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 AP3S1Q92572 193 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 UFD1Q92890 307 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 RAD51AP1Q96B01 352 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 RHBGQ9H310 441 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 TMEM129A0AVI4 362 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 ACADMP11310 421 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 PRKCAP17252 672 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 SOX18P35713 384 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 TPBGQ13641 420 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 YIF1BQ5BJH7 314 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 PPP2R2DQ66LE6 453 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 C1orf94Q6P1W5 598 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 NATD1Q8N6N6 113 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 AMER3Q8N944 861 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 TMEM163Q8TC26 289 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 KIAA1143Q96AT1 154 aaPredicted RBP12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 YIPF4Q9BSR8 244 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 OR52A5Q9H2C5 316 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 FGF20Q9NP95 211 aaPredicted RBP12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 TDP1Q9NUW8 608 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 SLC9A8Q9Y2E8 581 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 LAMA3Q16787 3333 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 COL4A3Q01955 1670 aa12.49□□□□□ -0.41
SLC28A1-201ENST00000286749 OR6C70A6NIJ9 312 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 WASHC1A8K0Z3 465 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 PRODHO43272 600 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 NDUFB5O43674 189 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 HPGDSO60760 199 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 PAPLNO95428 1278 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 KELP23276 732 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 PPP2R1BP30154 601 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 BUD31P41223 144 aaPredicted RBP12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 RAB40BQ12829 278 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 MAP4K2Q12851 820 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 KIAA1211LQ6NV74 962 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 CNIH2Q6PI25 160 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 PLET1Q6UQ28 207 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 WASH2PQ6VEQ5 465 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 SLC36A4Q6YBV0 504 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 KIAA0907Q7Z7F0 614 aaPredicted RBP12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 NUDT13Q86X67 352 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 NLGN4YQ8NFZ3 816 aaPredicted RBP12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 OR2L2Q8NH16 312 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 LRIG1Q96JA1 1093 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 AIF1LQ9BQI0 150 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 PRR14Q9BWN1 585 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 DPEP2Q9H4A9 486 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 ZCCHC3Q9NUD5 404 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 H7BY64 318 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 CASKO14936 926 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 NDUFS4O43181 175 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 RB1P06400 928 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 LIMS3P0CW19 117 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 LIMS4P0CW20 117 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 SLC2A2P11168 524 aaPredicted RBP12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 PSKH1P11801 424 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 GABRA5P31644 462 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 MAP2K3P46734 347 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 MTNR1AP48039 350 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 SLC6A11P48066 632 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 PRKAG1P54619 331 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 PPP3R1P63098 170 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 GALK2Q01415 458 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 P2RY14Q15391 338 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 GPR19Q15760 415 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms