RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PTBP1P26599 531 aaKnown RBP eCLIP9.82□□□□□ -0.84
SKA1-201ENST00000285116 MAN2A2P49641 1150 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 MNX1P50219 401 aaPredicted RBP9.82□□□□□ -0.84
SKA1-201ENST00000285116 CTSCP53634 463 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 PER3P56645 1201 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 SLBPQ14493 270 aaKnown RBP eCLIP9.82□□□□□ -0.84
SKA1-201ENST00000285116 MLC1Q15049 377 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 ZNF628Q5EBL2 1059 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 TMPRSS11BQ86T26 416 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 CHST14Q8NCH0 376 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 AKAP1Q92667 903 aaKnown RBP eCLIP9.82□□□□□ -0.842e-6■■□□□ 12.1
SKA1-201ENST00000285116 SCAMP4Q969E2 229 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 GTPBP3Q969Y2 492 aaKnown RBP9.82□□□□□ -0.84
SKA1-201ENST00000285116 GPR137Q96N19 417 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 SLC6A18Q96N87 628 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 NLNQ9BYT8 704 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 TAAR2Q9P1P5 351 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 NLKQ9UBE8 527 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 TESQ9UGI8 421 aaKnown RBP9.82□□□□□ -0.84
SKA1-201ENST00000285116 PHF11Q9UIL8 331 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 CLCA3PQ9Y6N3 262 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 F5P12259 2224 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 WWP2O00308 870 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 LYRM1O43325 122 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 LILRB3O75022 631 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 TP53P04637 393 aaPredicted RBP9.82□□□□□ -0.84
SKA1-201ENST00000285116 URODP06132 367 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 MSL3P1P0C860 447 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 TNNI3P19429 210 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 GABRR2P28476 465 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 SSTR4P31391 388 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 SDC2P34741 201 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 PPP3R1P63098 170 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 RGS1Q08116 209 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 SEC23BQ15437 767 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 PRSS53Q2L4Q9 553 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 ZNF697Q5TEC3 545 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 ASTLQ6HA08 431 aaPredicted RBP9.82□□□□□ -0.84
SKA1-201ENST00000285116 FAM122CQ6P4D5 195 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 METAP1DQ6UB28 335 aaPredicted RBP9.82□□□□□ -0.84
SKA1-201ENST00000285116 Q6ZVL8 140 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 ZNF765Q7L2R6 523 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 KCTD20Q7Z5Y7 419 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 MRGPREQ86SM8 312 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 Q8N402 240 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 OR9A1PQ8NGU1 263 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 WDR48Q8TAF3 677 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 SLC5A11Q8WWX8 675 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 UPRTQ96BW1 309 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 ZBED6CLQ96FA7 236 aaPredicted RBP9.82□□□□□ -0.84
SKA1-201ENST00000285116 ZNF558Q96NG5 402 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 RHBGQ9H310 441 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 NEUROD4Q9HD90 331 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 TRBV4-1A0A0J9YWV2 114 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 C17orf113A0A1B0GUU1 675 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 BTN3A3O00478 584 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 TSC22D2O75157 780 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 MTX2O75431 263 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 SCO1O75880 301 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 CKMP06732 381 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 HBQ1P09105 142 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 DDCP20711 480 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 MMP12P39900 470 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 DGKGP49619 791 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 TAS2R50P59544 299 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 ZNF91Q05481 1191 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 TMEM115Q12893 351 aaPredicted RBP9.81□□□□□ -0.84
SKA1-201ENST00000285116 C3orf38Q5JPI3 329 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 TEX261Q6UWH6 196 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 LCTLQ6UWM7 567 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 SLC39A5Q6ZMH5 540 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 GLCCI1Q86VQ1 547 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 CMTM8Q8IZV2 173 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 TAGAPQ8N103 731 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.81□□□□□ -0.84
SKA1-201ENST00000285116 GPR32P1Q8NGA4 272 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 BADQ92934 168 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 ZNF689Q96CS4 500 aaPredicted RBP9.81□□□□□ -0.84
SKA1-201ENST00000285116 ZNF354BQ96LW1 612 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 PITHD1Q9GZP4 211 aaPredicted RBP9.81□□□□□ -0.84
SKA1-201ENST00000285116 SPG21Q9NZD8 308 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 MAP4K5Q9Y4K4 846 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 U3KQ87 197 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 LRRK1Q38SD2 2015 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 TTC28Q96AY4 2481 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 A0A1W2PRQ8 180 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 OR2AG2A6NM03 316 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 TRIM77I1YAP6 450 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 I3L521 148 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 CLEC2LP0C7M8 214 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 APEX1P27695 318 aaKnown RBP9.81□□□□□ -0.84
SKA1-201ENST00000285116 TALDO1P37837 337 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 PREPP48147 710 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 KCNJ5P48544 419 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 ABATP80404 500 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 CYP4F8P98187 520 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 MFSD13AQ14CX5 517 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 SF3A2Q15428 464 aaKnown RBP9.81□□□□□ -0.84
SKA1-201ENST00000285116 LIPKQ5VXJ0 399 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 TCTN3Q6NUS6 607 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms