RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 PIWIL2Q8TC59 973 aaKnown RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 GRHL3Q8TE85 626 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 JADE3Q92613 823 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 SNRNP40Q96DI7 357 aaKnown RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 ZBED6CLQ96FA7 236 aaPredicted RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 THOC1Q96FV9 657 aaKnown RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 MARK4Q96L34 752 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 FCRL1Q96LA6 429 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 JSRP1Q96MG2 331 aaPredicted RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 ZNF681Q96N22 645 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 AMDHD1Q96NU7 426 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 ZBTB18Q99592 522 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 DPY30Q9C005 99 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 TSPAN10Q9H1Z9 355 aaPredicted RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 GLIPR2Q9H4G4 154 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 MEAF6Q9HAF1 191 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 OLAHQ9NV23 265 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 ATAD3AQ9NVI7 634 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 ASF1BQ9NVP2 202 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 PRODH2Q9UF12 536 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 KLF13Q9Y2Y9 288 aaPredicted RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 OR10H1Q9Y4A9 318 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 SNX8Q9Y5X2 465 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 ZFHX4Q86UP3 3567 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 DMXL2Q8TDJ6 3036 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 TNRC6AQ8NDV7 1962 aaKnown RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 A0A1W2PRB8 838 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 CAPN14A8MX76 684 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 MYO1GB0I1T2 1018 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 KLRC4-KLRK1H3BQV0 150 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 ACOT7O00154 380 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 SDHDO14521 159 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 KLF11O14901 512 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 TFECO14948 347 aaPredicted RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 POLR3GO15318 223 aaPredicted RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 PEX1O43933 1283 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 NME2P1O60361 137 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 ERN1O75460 977 aaKnown RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 BCAS2O75934 225 aaPredicted RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 NEURL1O76050 574 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 CBX7O95931 251 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 CRYABP02511 175 aaKnown RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 CLPSP04118 112 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 ZNF24P17028 368 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 NME2P22392 152 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 IL12BP29460 328 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 TRHRP34981 398 aaPredicted RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 MEOX1P50221 254 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 CDK9P50750 372 aaKnown RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 DIO3P55073 304 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 STX1BP61266 288 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 ALDH6A1Q02252 535 aaKnown RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 FUT7Q11130 342 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 MAP4K2Q12851 820 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 TP53BP2Q13625 1128 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 INAQ16352 499 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 PRSS53Q2L4Q9 553 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 MPEG1Q2M385 716 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 SLC9B1Q4ZJI4 515 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 PIGGQ5H8A4 983 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 MDGA2Q7Z553 956 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 SLC44A2Q8IWA5 706 aaPredicted RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 GPALPP1Q8IXQ4 340 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 CPSF7Q8N684 471 aaKnown RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 ZNF615Q8N8J6 731 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 PSD4Q8NDX1 1056 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 OR7G2Q8NG99 324 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 ZNF675Q8TD23 568 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 DIO2Q92813 273 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 MTERF3Q96E29 417 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 SPACA9Q96E40 222 aaPredicted RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 MAGEB18Q96M61 343 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 C7orf26Q96N11 449 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 DUSP26Q9BV47 211 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 FOLH1BQ9HBA9 442 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 C3orf14Q9HBI5 128 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 SLCO1B3Q9NPD5 702 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 MED4Q9NPJ6 270 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 SACM1LQ9NTJ5 587 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 TAS2R9Q9NYW1 312 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 HAO1Q9UJM8 370 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 EXO1Q9UQ84 846 aaKnown RBP6.04□□□□□ -1.44
CD44-204ENST00000279452 DTX4Q9Y2E6 619 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 NTNG1Q9Y2I2 539 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 USH1CQ9Y6N9 552 aa6.04□□□□□ -1.44
CD44-204ENST00000279452 FRG2CA6NGY1 282 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 TMEM200CA6NKL6 621 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 FAM166BA8MTA8 275 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 TCP11X1B4DZS4 312 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 C9JVG2 144 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 E9PBE3 544 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 NPIPA5E9PKD4 350 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 TP53I11O14683 189 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 UBDO15205 165 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 CDC40O60508 579 aaKnown RBP eCLIP6.03□□□□□ -1.44
CD44-204ENST00000279452 REM1O75628 298 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 SLITRK5O94991 958 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 NADKO95544 446 aaPredicted RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 CPSF4O95639 269 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms